Gene Dgeo_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2643 
Symbol 
ID4073874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp398190 
End bp399254 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content63% 
IMG OID641228833 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_594150 
Protein GI94972110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA TCATCCCCGC CGCCGGATTC GGCACACGGC TGCGGCCCCT GACCTATGCC 
CGGCCCAAAC CTGTATTGCC CGTCGCCAAC AAACCGATTA TCTGTCACGC GGTTCAAAAT
TTGGCTGCCG CCGGCATCAG GGAGATCGCC ATCATTGTCT CCAGCGTCAC CCGCAAGGCC
ATCGAGGGGG CAGTGAGCGA TCTGGAAGGC GTTCAGATCG CGTACATCGA GCAGCCAGAG
ATGCTCGGCC TAGGCGACGC CGTCAGATGG GCCCGTGACT GGGTCGGCGA GAGTGACTTC
TGCGTGTACC TGGGGGACAA TCTTTTCGAG CATGGCGTAA CCAGCTTCTT GGACGCCTTC
CGCAGCCGGC CGGTAGACGC GGTCCTCGCG CTCGTTGAGG TGCCGGATGC CCGCGCCTTT
GGTGTGGCCG TTCTTGACGA CCAGGACCGC ATCACGCAAC TGTTTGAAAA GCCCAAGTGC
CCTCCAAGCA ATCTTGCTGT GGCCGGGGTG TACTGCTTCA AAGCTTCGCT GTTCGGCATC
CTTGAGGCGT TGCCTCCCAG TGCGCGCGGC GAGTATGAGA TCACCGACGC CATTCAGCGG
TTGATCGAGG ACGGCGGACA GGTGATTGGC CAGCGTGTGG TGGGCTGGTG GAAAGACACC
GGGCGCCCCC TTGACCTGAT CGAGACCAAC CGCCTGCTGC TCGAACGGCT CGAACCCTGT
GTGCTGGGTG AGGTGACCGG CTCGCGCCTG GCAGGGCGGG TTGTGGTTGA GCCGGGGGCC
GAGGTGCACG GCAGTGTGAT CATGGGACCC GTGACCATCG CCAGCGGTGC CCGCATCGAG
AACGCCTACC TGGGTCCTTT TACCAGCGTG GGGCGCGGCA GCGTGATTCG CAACGCCGAG
GTCGAGTACA GCGTGATTGA CGAGGAGGCC GAAATCTGCG ACGTGAATGT GCGGCTTCAG
GAATGCCTGA TCGGGCTGCG CGCCCGCATT GTCGGGCACG GCGAGGTACC CAAGGTCCAC
CGCTTGATTC TGTCCGATAC CAGTGTCCTG GAATTCGGCT GCTGA
 
Protein sequence
MKAIIPAAGF GTRLRPLTYA RPKPVLPVAN KPIICHAVQN LAAAGIREIA IIVSSVTRKA 
IEGAVSDLEG VQIAYIEQPE MLGLGDAVRW ARDWVGESDF CVYLGDNLFE HGVTSFLDAF
RSRPVDAVLA LVEVPDARAF GVAVLDDQDR ITQLFEKPKC PPSNLAVAGV YCFKASLFGI
LEALPPSARG EYEITDAIQR LIEDGGQVIG QRVVGWWKDT GRPLDLIETN RLLLERLEPC
VLGEVTGSRL AGRVVVEPGA EVHGSVIMGP VTIASGARIE NAYLGPFTSV GRGSVIRNAE
VEYSVIDEEA EICDVNVRLQ ECLIGLRARI VGHGEVPKVH RLILSDTSVL EFGC