Gene Dgeo_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2636 
Symbol 
ID4073867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand- 
Start bp407219 
End bp408169 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content68% 
IMG OID641228839 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_594144 
Protein GI94972104 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.34834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC CTGGCATGTC CAACGCCATC ATCTGGCAGC GGCAAAACCT GCGCGAGCTG 
CCCAAGTTCC GCGACGGCAC GACCTACCTC TATCTCGAAC ACACACGGCT GGAACAGGAC 
GGGCGCGGGG TACGTGCCTA CCACCCTGAA GGGATGGTGA CCCTCCCGGC GGCGAGCCTC 
AGTGTGCTGC TGTTGGGGCC GGGCTGCTCG GTCAGTCACG AGGCAGTCAA GGCCCTCTCC 
GACACGGGCT GCTCGCTGCT GTGGGTGGGG GAGGGAGGCG TACGGCTTTA TGCCAGTGGC 
CTGGGTGAGA CGCGCAGCGC CGCCCGTCTC CAGCGTCAGG CGCTGCTGTG GGCCAACCCC 
CAGAGCCGCC TGCGGGTGGT CCGGCAGATG TACGCGATGC GTTTCCCCGA GGGACTGCCC 
CCGGACCTCA CCCTCGAGCA GATTCGTGGG CGCGAGGGAG CACGGGTGCG CGACGCTTAT 
GCCCGCTCGA GCCAGGCGTA CGGCGTCAGG TGGGACACCC GCCAGTACAA GCAGCAGGAC 
TGGCACCGCG CCACGCCCGT GAACAAGGCC ATCAGCGCTG GAAACGCCTG CCTGTATGGC 
CTCGCCCACG CCGCCATCTT GAGCATGGGC TACAGCCCCG CGCTGGGCTT CATTCACACC 
GGCAAGATGC TGAGCTTCGT GTACGACGTG GCCGACCTCT ACAAGCTGGA GGTGGTCCTG 
CCGGTCGCCT TTCGCGAGGC GGCCACTCCC GGCGACGACC TGGAACGGCG GGTCCGCACC 
GGCCTGCGCG ACCACATGAC CAAGTTGCGT TTGCTGGAGC GCATGGCCGC CGATCTCCTG 
CGCCTGCTGG GCGGGGACGA CACCGACCCG AACTCCACCG CCCCCGGCGA CCTGTGGGAC 
CCGGAGGGCC ACGCGGCGGG AGGGGTGAAC CATGCTGGTC ATGACTCTTG A
 
Protein sequence
MTEPGMSNAI IWQRQNLREL PKFRDGTTYL YLEHTRLEQD GRGVRAYHPE GMVTLPAASL 
SVLLLGPGCS VSHEAVKALS DTGCSLLWVG EGGVRLYASG LGETRSAARL QRQALLWANP 
QSRLRVVRQM YAMRFPEGLP PDLTLEQIRG REGARVRDAY ARSSQAYGVR WDTRQYKQQD 
WHRATPVNKA ISAGNACLYG LAHAAILSMG YSPALGFIHT GKMLSFVYDV ADLYKLEVVL 
PVAFREAATP GDDLERRVRT GLRDHMTKLR LLERMAADLL RLLGGDDTDP NSTAPGDLWD 
PEGHAAGGVN HAGHDS