| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2542 |
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| Symbol | |
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| ID | 4073773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008010 |
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| Strand | + |
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| Start bp | 505665 |
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| End bp | 507044 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641228933 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_594050 |
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| Protein GI | 94972010 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAACG AACTGGAGCG CAACGAGGCG GGCCGGGTGA ACAGCCCTCA GGAGGCTGCG
CGCTCCGTTT CCGTGACGCG GGACCTGCTG CTCCTCGCCT GGCCTGCCAT CACGGAGAAC
TTGCTCCAGA GCGCGATGGG CTTCGCGGAC AGCTTCTTCG TGTCCCGGCT GGGCCTGGAA
GCCGTCGCTG CTGTGGGCGT CTCCAACGCG CTGCTTCAGG TGTTCTTCGC GGTCTTCCTT
GCCGTTGCCA CCGCCTCCGG CACGTTCAGC GCCCGCGCGA CCGGCGCCAA GGATGCCGCC
GCGGTCCAGC GGGCGACGGT GCAGGCGTTG TGGCTGGCCG CCCTCGTCGG GCTGATCTGT
GGCCTCCTCG CCCTGGTGCT GGCGGGGCCA CTGCTCACCG TGATGGGGGC CGCGCCGGAA
GTCCGCGCTG CTGGGGAAAC CTACTTCCGC ATCGTGGCCG TGCCCTCAGT GGTCATCGCC
GTGATGTCTA CCGCAGGCGC GGTGTTGCGG GGGGCCGGGG ATACGCGGGC GGCCTTGAGG
GCGGGCCTGT GGATGAATGC CGCCCATGTC GTGCTGGACC CGCTCCTGAT CTTTGGCCTG
GGGTTTAGCG GCCTGGGCCT CGTGGGCGCG GGCGTGGCGA CGGTCCTCGC GCGGTTGCTG
GGGGCAGGAC TGCTGCTGGC ACGGCTCCGA CGGGCCGGGA CGCTGCCGTC CTCGTGGCGT
GGGGCCGGGC CGGACTGGGG CCTCATGCGC CGCATGTCGC GTCTGAGTGT TCCAACTGCC
CTGGAACGGT TGGCGATGCG CTTCGGGCAG ATCGTGTATT TCGGGCTGAT CCTGCGGCTG
GGTACCGAGG TCTACGCCGC CCATACCCTG ACCGGGAACT TCACGCTGTT CGCCTCGGTG
GCGGGAACCG GCCTCGCGGC AGCCATCAGC GCGCGGGTCG GGCAGCGGCT CGGCGCGGGC
GACGAGGGCG AGGCACGGCG CTATGCCCTG TCCGGCATCT GGGTGTCGTC CGTCTTGATG
ACGGCCCTCG CCCTGCTCGC CTGGGTGGCG TCGTTCTGGG GCGCGAGTCT CTTCACAAGT
GACGCGCGAG TCGTGGCCTT GATCGTGCTG GCCCTGGGCA TCGACGTCCT GACGCAACCG
GCAACGGGAG TGGTCACAGC CTTGACAGCG ACCCTGCAAG CCGGTGGCGA TACCCGCTTT
CCCATGTGGA CCACGCTGGT CGGCATCTGG GGCGTGAGGA CGGTCGGCGT GTATTTGCTG
GGAGTCCGCT GGGGACTTGG CCTCGCCGGG GTCTGGCTGG CCATTCTGCT GGACAACTCC
CTTCGGGCAT TCGCGCTCTG GCTCCGTTAC CGCTCGGGGC GCTGGATTCA GGGTCTCTGA
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| Protein sequence | MRNELERNEA GRVNSPQEAA RSVSVTRDLL LLAWPAITEN LLQSAMGFAD SFFVSRLGLE
AVAAVGVSNA LLQVFFAVFL AVATASGTFS ARATGAKDAA AVQRATVQAL WLAALVGLIC
GLLALVLAGP LLTVMGAAPE VRAAGETYFR IVAVPSVVIA VMSTAGAVLR GAGDTRAALR
AGLWMNAAHV VLDPLLIFGL GFSGLGLVGA GVATVLARLL GAGLLLARLR RAGTLPSSWR
GAGPDWGLMR RMSRLSVPTA LERLAMRFGQ IVYFGLILRL GTEVYAAHTL TGNFTLFASV
AGTGLAAAIS ARVGQRLGAG DEGEARRYAL SGIWVSSVLM TALALLAWVA SFWGASLFTS
DARVVALIVL ALGIDVLTQP ATGVVTALTA TLQAGGDTRF PMWTTLVGIW GVRTVGVYLL
GVRWGLGLAG VWLAILLDNS LRAFALWLRY RSGRWIQGL
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