Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4746 |
Symbol | panB |
ID | 4070684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5609320 |
End bp | 5610207 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986790 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_593819 |
Protein GI | 94971771 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0815324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTG CCACGGGCGA CTTCCGTTCT AAAGTCACGT CGTCGACACT TCTCGACAAG AAATCCAAGC ACGATCCAAT TACTTGCCTG ACCGCCTACG ACTACTCCAC TGCGCGCCTG GTGGATGAAG CCGGGATTGA CATGATCCTG GTGGGCGATT CGCTTGCCCA GACCATGCTG GGCTACGAGA ACACGCTGCC GGTCACCATG GACGAGATGC TGCACCACAC GCGGGCAGTT CGACGCGCGG TGCGTCATGC GTTCCTGATC GCAGATATGC CGTATGCGTC GTACCACGTT GGTGGGCGCG AATCGGTGCG CAACGCAGCA CGCTTCATCA AGGAAGGCGG CGCGGAGGCG GTGAAGATCG AAGGCGGCGA GAACCGCGCT GCTTTGATCG ATCGGCTGCT GGACGCGGAA GTTCCGGTGG TTGGGCACAT TGGCCTGACA CCGCAGTCGG TGCATCGCAT GGGCGGCTAT AAGGTGCAGG GCAAAACGAT TCGGGACATC GAGCAACTCA TGCGCGATGC AACGGCGCTT GATCGTGCCG GCGTTGTCGC GCTGGTGCTC GAGGGTATTC CGCGCGAAGT AGCGGCGATG ATCACAGCTG AGGTCGAGAC GCCAACGATT GGCATTGGCG CAGGGCCGGA TTGCGACGGC CAGGTGCTGG TGTTTCACGA CATCCTGAAC CTGACGTTTG CACCTCCGGC TAAGTTCGTG CGTCGCTACG CGGATGCAGC GGAATTGATT ACTGGCGCAG TGAAAGCGTT TCGCGACGAC GTGAAGACGG GCAGCTATCC CAGCGATGAC GAGTCGTATC ACCTGCCGAA AGAAGCGCAG GCGACGCTGG AGATGGTGCA GAATCGCAAG CACGCAATGC GGAAGTAG
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Protein sequence | MSIATGDFRS KVTSSTLLDK KSKHDPITCL TAYDYSTARL VDEAGIDMIL VGDSLAQTML GYENTLPVTM DEMLHHTRAV RRAVRHAFLI ADMPYASYHV GGRESVRNAA RFIKEGGAEA VKIEGGENRA ALIDRLLDAE VPVVGHIGLT PQSVHRMGGY KVQGKTIRDI EQLMRDATAL DRAGVVALVL EGIPREVAAM ITAEVETPTI GIGAGPDCDG QVLVFHDILN LTFAPPAKFV RRYADAAELI TGAVKAFRDD VKTGSYPSDD ESYHLPKEAQ ATLEMVQNRK HAMRK
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