| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4694 |
|---|
| Symbol | |
|---|
| ID | 4070744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5554479 |
|---|
| End bp | 5555435 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637986739 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_593768 |
|---|
| Protein GI | 94971720 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.711974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.226637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCTTT CCGAACGAGC TTTGATTGAG CGCATCCGGC GGCGAGCGTC ATCGCGCAAG
TTCTCGGCGA TCACGCGCGG CATTGGCGAC GATTGCGCCG TGCTCGATCC GCCACCGGGA
CATGAACTAC TGGTGACGAC GGATTTCTGC CTGGAGAACG TGCACTTCCG TCGCGAATGG
CATCCGGCGA AAGCTGTCGG ACACCGGTGT CTCGTGCGCG GGCTGAGTGA CATCGCGGCA
ATGGGTGGCG ATCCGCTGGC TGCGTTCCTC TCGCTCGCGT TGCCGGCGGA GATTCCGCAG
AAGTGGGTGG ATGGATTCTT CGATGGCTTG TTAGCGCTGG CGGAGAGATG GAAGGTGCCG
CTTGCAGGTG GTGATATTGC GCAGTCGCCA CAAGGCGTGA TGGCGGACAT TATGGTGCTG
GGCTCGGTGC CGCGCGGCAA AGCGATTCTA CGTTCCGGCG GGAAGCCCGG CGATGTGCTG
TATGTCACGG GAACGCTGGG ATTGTCGGTC GCAGCGTTGC AGGCGTTTCG CGCGGGAAAG
AAGCCGACAG CGAAGTCTAC GCCGCGACAT TTCTTCCCGG ACCCGCGAAT TGATATCGGC
CGCCTACTGC GCGAACGCAA GCTGGCTACG GCGATGATCG ACCTGAGCGA TGGACTATCA
ACCGATCTTT CGCATATTTG CGATGAGAGC GGCGTGGGGG CAGTGGTGTA TGCCACATCG
GTGCCGTACG TGGGCGGGGA AAACGGATTG GAATTCGCGC TGAATGGTGG TGAGGACTAT
GAACTGCTTT TCACCGCGAA CCCGCGGGCG CGAGTGCCGA AAGAAATCGA CGGCGTACCT
GTGACTGCGA TTGGCGAGAT CGTGCAGCGG CGCGGCATGT GGCTGGAAGA CAAGCGCGGT
AAAGTCGCGA AATTGAGGCC GCGCGGCTGG GAACACTTCC GCGGAGAAAA GAAATAG
|
|---|
| Protein sequence | MPLSERALIE RIRRRASSRK FSAITRGIGD DCAVLDPPPG HELLVTTDFC LENVHFRREW
HPAKAVGHRC LVRGLSDIAA MGGDPLAAFL SLALPAEIPQ KWVDGFFDGL LALAERWKVP
LAGGDIAQSP QGVMADIMVL GSVPRGKAIL RSGGKPGDVL YVTGTLGLSV AALQAFRAGK
KPTAKSTPRH FFPDPRIDIG RLLRERKLAT AMIDLSDGLS TDLSHICDES GVGAVVYATS
VPYVGGENGL EFALNGGEDY ELLFTANPRA RVPKEIDGVP VTAIGEIVQR RGMWLEDKRG
KVAKLRPRGW EHFRGEKK
|
|---|
| |