Gene Acid345_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4682 
Symbol 
ID4070727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5543212 
End bp5543472 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content55% 
IMG OID637986722 
ProductSecE subunit of protein translocation complex 
Protein accessionYP_593756 
Protein GI94971708 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000391505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00819357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAGC AGGCAGTAGT CACCGCCGAC GAGAGCAGCC TGGGCAGCAG GATGAAGAGC 
TGGCCGCAGC GCACCAAGTC GTTTTACAAC GACGTGCGCA CGGAAATGAA GAAGGTCAGC
ACGCCTTCGC GCAAGGAAGT GCAGTCCACC ACGGTAGTCG TAATCATCAC CGTGTTCATC
TTCGGCCTGT ACTTCTGGTT GGTGGATAAC GCGATCGGCA AGGGCATCGA TTACATGTTT
ACGTACTTCA AGCACCACTA A
 
Protein sequence
MAKQAVVTAD ESSLGSRMKS WPQRTKSFYN DVRTEMKKVS TPSRKEVQST TVVVIITVFI 
FGLYFWLVDN AIGKGIDYMF TYFKHH