| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4680 |
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| Symbol | rplK |
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| ID | 4070725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5542053 |
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| End bp | 5542484 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986720 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_593754 |
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| Protein GI | 94971706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00022611 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00273455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAGTAACTGG ACAAGTCAAA CTGCAGATCG CCGCAGGCAA GGCAACGCCG
GCCCCGCCGG TCGGCCCGGC CCTCGGCCAG GCGCAGATCA ACATCATGGA GTTCTGCAAG
CAGTTCAACG CGAAGACTGC GAGCAAGGAC CTCGAGGGAT TCACTATCCC GGTCGTCATC
ACCGTTTATA ACGATCGCAG CTTCACCTTC GTGACCAAGA CCCCGCCGGC CTCCGACCTT
CTCCGCAAGG CCGCTGGCGT AGCCAAGGGC TCGGGCGTGC CGAACAAAGA CAAGGTCGGC
AAGGTCACCG AGAAGCAGGT CGTAGAGATC GCGAAGCAGA AGATGCCTGA CTTGAACGCC
GCCTCCGTCG AAGCTGCGAT CAACAGCATC AAGGGCACCG CGCGCTCGAT GGGCATCGAT
ATCGTCCCGT AA
|
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| Protein sequence | MAKKVTGQVK LQIAAGKATP APPVGPALGQ AQINIMEFCK QFNAKTASKD LEGFTIPVVI
TVYNDRSFTF VTKTPPASDL LRKAAGVAKG SGVPNKDKVG KVTEKQVVEI AKQKMPDLNA
ASVEAAINSI KGTARSMGID IVP
|
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