Gene Acid345_4665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4665 
Symbol 
ID4070710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5522900 
End bp5523757 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content56% 
IMG OID637986705 
Productrhomboid-like protein 
Protein accessionYP_593739 
Protein GI94971691 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.545556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCA CATCGGGAAT GGAATTGAGC CTGCCGCCGT TTACGCCGGC AGTGACCTGG 
CTGTTGGGAA TCAATGTTGG CGTGTTCTTC GTGATCGAGT TGCTCTCGCT TGCGAAGATG
GGTGGACCGC TCCACCTGTT GGCCTATGCC GCGCTCGTTC CATTCAACGT ACTGCACGGC
CACGTGTATG AACTGGTCAC GTATTCGTTC CTTCATGCCG GCGGTATGCA CTTGTTCGGC
AACATGCTGG GCCTTTGGAT GTTCGGATCT CAGATCGAAG GCGACTTTGG CACCCGGCGA
TTTTTGTCGT TCTACTTCTG GTGCGTAGTA GGCGGAGCGC TCACGACTGT AGCCGTCTCC
TACACCGGAA TCCTGGGTAT CTCGCCACTC TTGCCGACGA TCGGTGCTTC GGCAGGTGTG
TATGGCATCC TGATCGCGTT TGGCGTACTG CACGCAGACC AGGAAATCTA TATGCTTCCC
TTCCCGTTCA AAGTGAAGGC GAAGTATCTC GTCGGCATCC TGGTTGTGGT CACGCTCGCA
TTCGCTTTGT CGGAGAGCAA CGGCACGTCG GGTGCTTCGA TCGCCTACGC CGCCCATCTC
GGCGGACTGA TTTTCGGCTA CATCTACATC AAGGCCTTTG CGCGACGCGG AGCGAAGTCC
CTGGTTTCCG AACAGTATTA CGGGATACGC AACGCGTATT ATCGCTGGAA GCGTAACCGC
GCCAAGAAGA AGTTCGAAGT CTACATGCGC CAGCACAAGC GCGAGGACTA CTTCGACCAG
TACGGAAACT TCAAAGACCC AAACAGCAAA GACGACAAAG GCAATGGCCA ATCGTCCGGC
GGTGGATGGG TGAATTAA
 
Protein sequence
MRRTSGMELS LPPFTPAVTW LLGINVGVFF VIELLSLAKM GGPLHLLAYA ALVPFNVLHG 
HVYELVTYSF LHAGGMHLFG NMLGLWMFGS QIEGDFGTRR FLSFYFWCVV GGALTTVAVS
YTGILGISPL LPTIGASAGV YGILIAFGVL HADQEIYMLP FPFKVKAKYL VGILVVVTLA
FALSESNGTS GASIAYAAHL GGLIFGYIYI KAFARRGAKS LVSEQYYGIR NAYYRWKRNR
AKKKFEVYMR QHKREDYFDQ YGNFKDPNSK DDKGNGQSSG GGWVN