| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4656 |
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| Symbol | |
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| ID | 4070813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5512291 |
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| End bp | 5514312 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986696 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_593730 |
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| Protein GI | 94971682 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.203554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA CCAAAGATCC CGCAAAGCAA GCCGAAGACC TGCGCGAAAA GCTGCGTTAT
CACGAACATC GCTATTACGT GCTCGACGAC CCGGAAATCT CGGACGCCGA CTATGACGTG
ATGATGAACG AGTTGAAGGC CTTGGAGGCC AAGCACCCCG AGCTGTTGAC CCCGGATTCG
CCCACCCAGC GCGTGGGCGG AAAGCCGCGC GAGGGCTTTG TAAAAGTGGC GCATTCCGCG
CCCATGCTGT CGCTGGACAA CGCCTACAAC GAGGAGGAAC TCCGCGACTG GGCCCGGCGC
GTAGAAGAAC TCAGCGGGAA GGCCGAGATC GAGTACGAGT GTGAGTTGAA GCTGGATGGG
CTCTCGATGG CGCTGCGCTA CCAGGATGCG CGCTTTGTGC TGGCCGTCAC CCGCGGCGAT
GGCTCCATCG GCGAAGACGT GACGCTCAAC TTGCGGACAG TGAAGTCGGT GCCGCTCGGC
GTCAGTTCCG CCACGTTGAA GAAGACCCAC ATGCTCGGCG ATTTCGAAGT GCGCGGCGAA
GTGATCTTCC CAACCAAATC GTTCGAGAAG ATGAACGAAG ACCGCGAAAA GCAGGGGCTG
GCGAAGTTTG CTAACCCGCG AAACGCGGCG GCCGGCGCCG TGCGCGTGCT GGAGCCCAAC
ATCACCGCGC AGAGGCGTCT GGATTTTTAT GCGTACTTCC TGCTGGTGGA CGGCCGCGTG
CATATCGATC GGCAATCCGA GGCGCTCGAC ACGTTGGAGA AACTTGGGTT CAAGGTGAAT
TCCAATCGCG CGGTCTTCAA GTCGATTGAT GACGTGCTGA AATTCATCCA CAAGAAAGAA
GAAGATCGCG AGAAGCTGCC TTACGAAATT GACGGCGTCG TGATCAAGGT CAACAGCACC
GCACTCTGGC AGCGCCTGGG CTTCACCGGC AAAGCGCCGC GTTGGGCGAT CGCTTACAAA
TACGCGGCGC GCGCGGCCGT TACGCAGGTG GAAGACATTC TTGTGCAGGT GGGACGCACC
GGGAAACTCA CGCCAGTCGC GGCTTTGAAG CCTGTGCCCA TCGGCGGCAC AACGGTGAGC
CGCGCCACCC TCCACAACAT GGACGAGATC GATCGCCTTG GATTGCTCAT CGGCGATTGG
GTGCAGGTCG AGCGCGGCGG CGATGTGATC CCCAAGGTCG TGAAGGTCAT CGACGACAAG
GATCACCCGC GCGGCAAGAA GAAATTCAAG ATGCCCGAAC GTTGCCCCGA ATGCGGCGGC
CACGTTGTAC GCACCGAGGG CGAGGCCGAC CATCGCTGTG TGAATGCGAA TTGTCCGGCG
AAACTGCGCG AGAGCATTCT GCACTTCGCG TCGCGCGGCG TGATGAACAT CGAGGGAATG
GGCGATTCGC TGGTCAACCA ACTCGTCGAC CGAGGGCTGG TAAAGAACGT GGCCGATATC
TACGAACTCG ACGAAGAGAA GCTTCTCTCG CTCGAGCGCA TGGGCAAGAA GTCAGCTCAG
AACATCCTCG ACGAGATTAA AGGCACGAAG AAGTTGCCGC TGGAGCGCGT GATCTACGGT
CTCGGCATCC GCATGGTAGG CGAGCGCACC GCGCAATTCC TCGCCGAACA CTTCGGTTCG
CTCGATGGCG TGATGAAAGC CACCGAAGAA GAGCTGCTGG AAGTCGAAGA AGTCGGGCCG
CGCATCGCGC AGAGTATTCA CGAGTTCTTC GCCGAGCCCA GCAATCGCGA ACTGGTAAAA
CGCCTCGAAG CCGCCGGGCT GCAATTCAAG GGCGTAAAGA AAGAGCGCGG CACCGCGCTC
GCCGGACAAA CCTTCGTCCT GACCGGCAGC TTACCGACCT ACTCGCGCGA TGAAGCCAAG
AAACTGATCG AAGATGCCGG CGGAAAAGTC AGTGGGTCGG TGAGCAAAAA AACCAACTAT
GTCGTCGCCG GCGAAGAGGC CGGATCGAAG CTCGACAAAG CCCGCGACCT GGGCGTTGCG
GTAATCGACG AAGATGCCCT GAAAAAACTG CTAGGGAAGT AG
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| Protein sequence | MSRTKDPAKQ AEDLREKLRY HEHRYYVLDD PEISDADYDV MMNELKALEA KHPELLTPDS
PTQRVGGKPR EGFVKVAHSA PMLSLDNAYN EEELRDWARR VEELSGKAEI EYECELKLDG
LSMALRYQDA RFVLAVTRGD GSIGEDVTLN LRTVKSVPLG VSSATLKKTH MLGDFEVRGE
VIFPTKSFEK MNEDREKQGL AKFANPRNAA AGAVRVLEPN ITAQRRLDFY AYFLLVDGRV
HIDRQSEALD TLEKLGFKVN SNRAVFKSID DVLKFIHKKE EDREKLPYEI DGVVIKVNST
ALWQRLGFTG KAPRWAIAYK YAARAAVTQV EDILVQVGRT GKLTPVAALK PVPIGGTTVS
RATLHNMDEI DRLGLLIGDW VQVERGGDVI PKVVKVIDDK DHPRGKKKFK MPERCPECGG
HVVRTEGEAD HRCVNANCPA KLRESILHFA SRGVMNIEGM GDSLVNQLVD RGLVKNVADI
YELDEEKLLS LERMGKKSAQ NILDEIKGTK KLPLERVIYG LGIRMVGERT AQFLAEHFGS
LDGVMKATEE ELLEVEEVGP RIAQSIHEFF AEPSNRELVK RLEAAGLQFK GVKKERGTAL
AGQTFVLTGS LPTYSRDEAK KLIEDAGGKV SGSVSKKTNY VVAGEEAGSK LDKARDLGVA
VIDEDALKKL LGK
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