| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4590 |
|---|
| Symbol | |
|---|
| ID | 4071535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5437139 |
|---|
| End bp | 5438044 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637986630 |
|---|
| Product | Pirin-like |
|---|
| Protein accession | YP_593664 |
|---|
| Protein GI | 94971616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00966452 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.667256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGC GACCGGTAAA ACAGATACTA CAGACCAAAC CGACACTCGA GGGCGCGGGA
GTGAAGCTCC AGCGCGCCTT CGGCTTCGGC AAGACAAAGG ACTTCGACCC GTTCCTGCTG
CTCGACGATT TTCGCAATGA GCATCCGGAA GACTATCTCG CGGGATTTCC GTGGCATCCG
CACCGCGGGA TCGAGACGAT TACCTACGTG CTCGCAGGCA GCGTGGAACA CGGGGACAGC
CTGGGCAACA AGGGCAAGAT GGGCGCAGGT GATGTGCAAT GGATGACCGC AGGCAGCGGC
ATCCTGCATC AGGAGATGCC CAAGGGCGAC AACGACGGCC GGATGCACGG CTTCCAATTG
TGGGCGAACC TGCCTGCATC GTTGAAGATG ACGGACCCCC GCTACCAGGA CATTCCGTCG
AGCGCGATTC CCGAAGTCAC GGACGACGAC GGCACCAAGG CGCGCATTAT CTGCGGCGAG
TTCTGGGGCC AGCGCGGACC GGTGGAAGGC GTGGCCGCCG ATCCGGCGTA CGTGGACATC
TCGGTATCGC CGAATCAGAA GAAGCGCATC AAGGTGGACG TCACGCGCAA TGCATTTGCG
TATGTCTTCG CGGGAGCAGG AACCTTCCGC GATGCGTCGG AGCCGCAGGC CGTGCTGACC
GAACACACCG CGCGTCCGGA AGACGCGCCG ACCTACGACG CGACCAACCA CTCGTTAGTG
CTGTTCGATC GCGGCGATGA GTTGGTGGTG CAGGCGGGGC CGGAAGGGAT TCGCTTCCTG
CTCGTCTCGG GCAAACCGCT CGAAGAACCC GTCGCGTGGT ATGGGCCGAT CGTGATGAAC
ACGCAAGCCG AGCTGCGAAC GGCGATGGAT GAGTTGCAGA CCGGGAAGTT CATTAAACAT
CGGTAG
|
|---|
| Protein sequence | MSLRPVKQIL QTKPTLEGAG VKLQRAFGFG KTKDFDPFLL LDDFRNEHPE DYLAGFPWHP
HRGIETITYV LAGSVEHGDS LGNKGKMGAG DVQWMTAGSG ILHQEMPKGD NDGRMHGFQL
WANLPASLKM TDPRYQDIPS SAIPEVTDDD GTKARIICGE FWGQRGPVEG VAADPAYVDI
SVSPNQKKRI KVDVTRNAFA YVFAGAGTFR DASEPQAVLT EHTARPEDAP TYDATNHSLV
LFDRGDELVV QAGPEGIRFL LVSGKPLEEP VAWYGPIVMN TQAELRTAMD ELQTGKFIKH
R
|
|---|
| |