| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4577 |
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| Symbol | |
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| ID | 4071522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5425482 |
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| End bp | 5426546 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986617 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_593651 |
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| Protein GI | 94971603 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.47776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCAA ACAAGTTCTT CATATTTCTC GGTGTACTAG TAATTCTCGC GACAGCCTTC
TATTTCCTTA CTACCAACCG TTCCGGCGAC GAGGTCCTGA TCGGAGTGGT GGACGCCAAC
AATGTTGTCG TCAGCTCCAG AATCATGGGC CGCATTGAGC GCCTCGCCGT GGATGAAGGT
ACCCCCGTGA AGCAGGGCGA CCTGATTGCC GTGATTGACT CCGGGGAATT GCAGGCCCAG
AAAGCCGCCG CCGAAACGAC CATCGCCAGC TATCGCGCGC GAGTTTCCCA GGCGCGCGCC
GGCGCTACGC AAGCCGAAGG CGAAACCGCC AGCCAACTCA CCACCGCACA AGCACGCTTA
CAGGCCGCAC GTTCCGCCTA CGCGCAATCA CAAGCTGATC TAGATCGCGT GAAGAGTGAC
GCTACCCGCC TCATCGAGTT GGCAAAGCAG GGCGTGGCTT CGAAAGCCGA TCAGGAGCGT
TCCGACGCGC AACTCAAGAT GGCGCAAGCC GCGGTACAGA ACGCATCCGA CCAGATCCGC
GCTGCGGAAT CGGACGTGAA AACCTACCAG GCGCGCCTCG AACAGGCGAA AGCCGCGCAG
AGCACGTTGG CCGGCAGCCA GGAAGATGTG AAGACCGCTG AAGCCCAGCT CACCGAAGCG
GAGACGCGTC TCGGCTACAC GCAGGTCGTC GCTCCGGTAA CCGGCGTCGT GAACGTGCGC
GCCGCGCGTG AAGGCGAGGT CGTCAATCCC GGGCAGGCGA TCGTCACGGT CGTGGATTAC
GGCGACACCT GGGTCTATGC GCCGCTTCCG GAAACCGATT CTGGCGGCAT CAATCTTGGC
GACACACTCA CCGTCCGTTA TCCGTGGAAC GCGACGGAGC AGGGCAAGGT CATCTACAAA
GCCGCCGAAG CCGACTTCGC CACCCAGCGT GACGTGAGCC GTACCAAGCG CGACATCAAG
ACCATCGCCA TCAAGGTCCG CGTGCAGAAC AACCAACAAG GCAAGCTCGT GCCCGGCATG
ACCGCCGAAG TGCTGGTGCC GAAGAGCAAA CAGGGTGGCC AATGA
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| Protein sequence | MKPNKFFIFL GVLVILATAF YFLTTNRSGD EVLIGVVDAN NVVVSSRIMG RIERLAVDEG
TPVKQGDLIA VIDSGELQAQ KAAAETTIAS YRARVSQARA GATQAEGETA SQLTTAQARL
QAARSAYAQS QADLDRVKSD ATRLIELAKQ GVASKADQER SDAQLKMAQA AVQNASDQIR
AAESDVKTYQ ARLEQAKAAQ STLAGSQEDV KTAEAQLTEA ETRLGYTQVV APVTGVVNVR
AAREGEVVNP GQAIVTVVDY GDTWVYAPLP ETDSGGINLG DTLTVRYPWN ATEQGKVIYK
AAEADFATQR DVSRTKRDIK TIAIKVRVQN NQQGKLVPGM TAEVLVPKSK QGGQ
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