| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4572 |
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| Symbol | |
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| ID | 4071517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5419075 |
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| End bp | 5421513 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637986612 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_593646 |
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| Protein GI | 94971598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.443646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.637392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACCC TGCTTTCTGA CCTTCGATTC AGCTTTCGGC AACTCGTAAA GAACCCCGGC
CTGAGCCTGA CGGCAATCGT TTCCCTGGCA TTTGGGATTG GCGCGACTAC GGCGGTGTTC
AGCGTGGTGT GGGCGATCCT GATGAACCCG TACCCCTATG CGAATAACGA CCGCATGTAC
CACATGCGGC TATGGGACAT CCACGGCCGG CAAACGGGAT TCGGATTGAC GGCTCCGCAA
TGGCAGGAGC TGAAGAAGTC TCCGGTGATC GAGGATGCGT TTCTGGTGGG CGGCTGGAAC
CTGACGGTCA CTGGTAGCGA CGTGCCCGAG GATCTGAACG GCGTTTACAT GTCGTCGAAC
AGCATGAACT TTCTTGGAGT TCCGGCGCTG CTCGGCCGTG GTTTGATTCC CGCCGATGCG
GTGGACGGGC AAGATCCGCA GCCTATCGTG GTACTCGGGA ACAAGTTCTG GCACCGGCAC
TACAACGGCG ATCCGTCGGT GATTGGGAAG AACATCCAGT TGGTGCGGAA GAACTACACC
ATTGTGGGTG TGATGCCGCC GCGCTTCACC TGGGAAGATG GCGACGTCTA CACGCCGGAG
AAGATCACGC AGGATCCGGT AAAGGCGTAT TACGTCGGCA TACGACTGAA GCCGGGCGTG
ACGCGGGCGC AGGCCAACGC AGCGCTCGAG CCGCTGATCG TGGAATTTCA GAAGCAGAGT
CCGAGCCACT TCGGCGCCGA TAAGTTCCGC TTCACCGTGG TCGGGCTGAA CGACGACTTC
CTCAAAGATC TCGGGGGAAC GCTGGCGCTG TTGATATGCG CGGTGGGATT ACTGCTGGCG
ATTGGCTGTG GCAATGTTTC AATCCTGTTA CTCGCGCGCG GCACGGCACG ACAACATGAG
TTCGCGGTAC GCAGCGCGAT TGGCGCGAGC CGTCAGCGGA TTGTTCGCCA ACTCCTGACG
GAGTCGCTGA TGCTGGCGCT GACTGGAGCC GCGCTGGGCG TGCTGCTCTC GTGGAAGACG
ATCCAGGTCA TCACCGACTT ATTGCCAAAG TATTCGTTTC CGCACGAGGC GGAAATTCGG
CTCAATGTGC CGGTGCTGGT GTTCAGCGTT TTGATTTCGA TTTTCGCGGG CGTGTTGTTT
GGAATGTGGC CGGCGTTGCA GTTCTCACGG CCGAACGTGA GCGAGGTGAT GCAATCGAGC
ACGCGGAAGA TCGTGGGCAA CGTGCGCGGA CGCGGCGTGT ACAACGCGCT TATCGGCGGG
CAGATTGCGT TGACGATGTT GTTGCTCGCC GGCGCGGGCG CGGCGATGGA AGGCTTCTTG
AAGATGATGC ACGCACCGCT CGGATACGAT CCGCACAACG TGATGAGCGT GGGCATCCCG
GTACACGATG GGACGTACAA AACGTGGGAG TCACGCGTGG CGTACTTTGA GCAGCTGCAG
AAAAAAATTG CCGAGGTTCC GGGCGTAAAA ATGACTTCGA TAGCGCATAA CGCGACGCCT
CCGGCGAATG GCTTCGAAAT GAAGGCCGAA GTGTTGGGCG AATCAACACA GAGCGAGCGG
AAGATTCGTA TCAACCTGGT AGATCCGCAA TACTTCCCGA TTCTTCGGGT GCCGCTGGCG
CAAGGCCGTA TTTGGAATGA AAGCGAAAAC CACAATGCTG CGCATCTCGC GGTGATCAAC
GAGACGATGG CGAAGCAATT CTTCCCCAAT GGCGACGCGA TTGGGCACTC GATCAAGATG
GCGGAACTGA AACCCGAGCC ACCATACTTT GTGGGGACGC AGGGTTCCGA CGACTGGATG
CAGGTTGTTG GCATTGTTGC GGACAAGAAG AACGATGGTC TGAGCAAGCC AGTGAAGCCG
GAGGCGTTCA TTCCGAACAC GATCGCGATG GGAATGTTCA CGCAGATCCT GGTGCGGTCT
GACGCGTCAC CGCTGACACT GCTGCACGCG ATCAAATTGA AAGTGAGTTC CGTGGACCCG
GACCAGCAGG TGAATGGCCA GGTAGACGAT CTGGAGCATT GGATTTCCAG CCAGCAGGAG
TGGCAGAACG AACACTTGAT TGCGTGGCTC TTCGGCGCGT TCGCGGTTCT GGCGCTGTTG
CTGGCGTCGG TTGGACTGTA CAGCGTGGTG TCGTATTCGG TGGCACAGCG GACGAACGAA
TTCGGCATCC GAGTAGCGCT GGGGGCTCAG CGCGGACATG TGCTGAAGAT TGTGTTCTCT
TCAGCGATCG GTGCGGTTGC GGGTGGGATG GGCGCGGGAC TGGTGCTGGC GCTGGCGTCA
AGCAAACTGC TGGCGCATTG GTCGGAGCAC AGCGTGCGCG ATCCGTTGAT TCTCGTCGGG
GTGACGGTGG TGCTGGGGGT CGTGGCGTTG CTTTCGTGCG TGGTTCCGGC GCGGAAGGCA
CTGGGAATCG ATCCGATGAC CGCGCTAAGG TATGAGTGA
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| Protein sequence | MGTLLSDLRF SFRQLVKNPG LSLTAIVSLA FGIGATTAVF SVVWAILMNP YPYANNDRMY
HMRLWDIHGR QTGFGLTAPQ WQELKKSPVI EDAFLVGGWN LTVTGSDVPE DLNGVYMSSN
SMNFLGVPAL LGRGLIPADA VDGQDPQPIV VLGNKFWHRH YNGDPSVIGK NIQLVRKNYT
IVGVMPPRFT WEDGDVYTPE KITQDPVKAY YVGIRLKPGV TRAQANAALE PLIVEFQKQS
PSHFGADKFR FTVVGLNDDF LKDLGGTLAL LICAVGLLLA IGCGNVSILL LARGTARQHE
FAVRSAIGAS RQRIVRQLLT ESLMLALTGA ALGVLLSWKT IQVITDLLPK YSFPHEAEIR
LNVPVLVFSV LISIFAGVLF GMWPALQFSR PNVSEVMQSS TRKIVGNVRG RGVYNALIGG
QIALTMLLLA GAGAAMEGFL KMMHAPLGYD PHNVMSVGIP VHDGTYKTWE SRVAYFEQLQ
KKIAEVPGVK MTSIAHNATP PANGFEMKAE VLGESTQSER KIRINLVDPQ YFPILRVPLA
QGRIWNESEN HNAAHLAVIN ETMAKQFFPN GDAIGHSIKM AELKPEPPYF VGTQGSDDWM
QVVGIVADKK NDGLSKPVKP EAFIPNTIAM GMFTQILVRS DASPLTLLHA IKLKVSSVDP
DQQVNGQVDD LEHWISSQQE WQNEHLIAWL FGAFAVLALL LASVGLYSVV SYSVAQRTNE
FGIRVALGAQ RGHVLKIVFS SAIGAVAGGM GAGLVLALAS SKLLAHWSEH SVRDPLILVG
VTVVLGVVAL LSCVVPARKA LGIDPMTALR YE
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