| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4540 |
|---|
| Symbol | |
|---|
| ID | 4070218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5383833 |
|---|
| End bp | 5384912 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986579 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_593614 |
|---|
| Protein GI | 94971566 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000021567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.35999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAG CTGCAAAACC AAGCGCGGTG CAACCTCAGA ACAGCAGTTC GGCGGAAGTC
GGAACCATCG TTACCGGCGG AGAACGAAAA GTGAACCCCG GACCCGATCC GAAAAACGAT
CGTAAGCCGA CGCGGACGCC GGATCCGAAG TTCAAGATTT TTTCCGGGGC GGCGAATGAA
CCGCTCGCGC AAGAAATTTG CGCGTTCCTT GGAATTCCGC TGGGACAGAC AAAGCTCACC
AAGTTTTCGG ATGGCGAGAT TTATGTCCAG ATCCTCGAAA ACGTGCGCGG GGGGGACATC
TTCCTGGTGC AGCCGACGTG TCACCCGGTG GACCATCACT TGATGCAGTT GCTGCTGATG
ATTGACGCGT TGAAGCGCGC CTCGGCACGA CGCATTACGA CGGTGATTCC GTATTTTGGC
TATGCGCGTC AGGACCGCAA GGACAAGCCG CGTGTTCCGG TGAGCGCGAA GCTCGTCGCC
GATTTGCTGA CGACGGCCGG TGCGGATCGC GCACTCGTTG TTGACTTGCA CGCGCCGCAG
ATCCAGGGCT TCTTCAATAT CCCGGTGGAC CATTTATTTG GATCACCGGT GTTGGTGGAC
TACTTCAAGA AGCTGGAACT GCCCGATCTG ACCGTGGTTT CGCCGGACGC GGGCGGTGTG
GAACGCGCCA GGTTCTTTGC GAAGAAGATG GATTCGGCGC TGGCGATTGT GGACAAACGC
CGCACCGACA TGAACGTGAC CGAGGTGATG CACGTGATCG GCGATGTACA CGGCCGGACG
TGCTTGATCC TCGACGACAT TATCGATACC GCGGGAACGC TGGTGAAGAC GGCCCAGGCC
CTGGCGGATG CAGGCGCTTC GGAGGTTTAC GCATGCGCCT CGCACGCTGT GCTTTCGGGA
GAAGCGATTA ATCGCATCTC GAAGTCGGTG CTCAAGGAGT TAGTTGTAAC CAACACGATT
CCCCTGACGG ATGCCGGCAA AGCCGAGCCC AAGATCAAGG TGCTCTCGAT TGCCGGATTG
ATCGCTCGCG CGATCCAGTC GATTCACGAA GAGACCTCCG TCAGCAAACT GTTTTTGTAA
|
|---|
| Protein sequence | MDTAAKPSAV QPQNSSSAEV GTIVTGGERK VNPGPDPKND RKPTRTPDPK FKIFSGAANE
PLAQEICAFL GIPLGQTKLT KFSDGEIYVQ ILENVRGGDI FLVQPTCHPV DHHLMQLLLM
IDALKRASAR RITTVIPYFG YARQDRKDKP RVPVSAKLVA DLLTTAGADR ALVVDLHAPQ
IQGFFNIPVD HLFGSPVLVD YFKKLELPDL TVVSPDAGGV ERARFFAKKM DSALAIVDKR
RTDMNVTEVM HVIGDVHGRT CLILDDIIDT AGTLVKTAQA LADAGASEVY ACASHAVLSG
EAINRISKSV LKELVVTNTI PLTDAGKAEP KIKVLSIAGL IARAIQSIHE ETSVSKLFL
|
|---|
| |