| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4538 |
|---|
| Symbol | |
|---|
| ID | 4070216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5382382 |
|---|
| End bp | 5383068 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637986577 |
|---|
| Product | peptidyl-tRNA hydrolase |
|---|
| Protein accession | YP_593612 |
|---|
| Protein GI | 94971564 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
|---|
| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0234872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.341746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGAG AGGGTGTCGC GGGTTCGAGA GTCGTGCTGG CTCGCGCGAA GCGTTACGAG
GAACAGCAGG GGAAAGACGG CGTGAAACTG ATAGTGGGGC TCGGCAATCC GGGCATGCAG
TATCAGTTCA CGCCGCATAA CCTGGGGTTC CTGGCGGTGG ACCGGATTGC CGAGAAGTAC
GGGATCCGGG TGGCGAACCG GAATTGCAAG GCGCTTACCG GCCGCGGAGT AATTGAGGGA
GTGGATGTAG TCCTGGCGAA GCCGGAGACC TACATGAACC TCAGCGGCGC GTCGGTTCAA
GAGCTCGTGA GTGAGCTTGA GATCGACGGG ACTAAGGACA TGATCGTGAT CTATGACGAT
CTCGATCTGC CGTATGGAAG CATACGGGTC CGGGAGCGGG GCAGTGCCGG AGGCCACAAC
GGGGTGCAAA GCATTATCGG CGCCCTGGAT ACGCAGGAGT TTTTGCGGAT CCGCATTGGG
ATTGCGCCTG AGTTCAAGTT GAGCGACGGC GCCAGTTACG TTCTTTCGCA GTTGAAGAAG
TCGCAGTTGC CGGTAGTGGA CCAGGCATTG GATGACGCGG CCGAGGCCGT GAAGGTCATT
CTGAGAGAAG GTCCAGGGCC GGCGATGAAC CGGTTCAACC GGAAGCCTGA GCCGCCAGAG
AGTGGTGGCG AAGTGGCTGC GAAGTAG
|
|---|
| Protein sequence | MTREGVAGSR VVLARAKRYE EQQGKDGVKL IVGLGNPGMQ YQFTPHNLGF LAVDRIAEKY
GIRVANRNCK ALTGRGVIEG VDVVLAKPET YMNLSGASVQ ELVSELEIDG TKDMIVIYDD
LDLPYGSIRV RERGSAGGHN GVQSIIGALD TQEFLRIRIG IAPEFKLSDG ASYVLSQLKK
SQLPVVDQAL DDAAEAVKVI LREGPGPAMN RFNRKPEPPE SGGEVAAK
|
|---|
| |