Gene Acid345_4537 details

Gene Information

• Locus tag: Acid345_4537
• Symbol: rpsF
• ID: 4070215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: -
• Start bp: 5381871
• End bp: 5382314
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637986576
• Product: 30S ribosomal protein S6
• Protein accession: YP_593611
• Protein GI: 94971563
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.287316
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.325201
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGCGTA CGTATGAAGT GATGTTCATC GTTCGGCCGG ATCTGACCGA CGAGGACCTG 
GACAAGCTAG TTTCCACTCT GGAGACGCAG GTGGGCACGG CGGGTGGCAC GATTAAGTCT 
GTCGACAAGA TGGGCAAGCG CCGCTTGGCG TATGAAGTCA GCACGTTCAC GGACGGGATG 
TACATCCTGT TCACGATTGA AGGCGAAGGC GCGCTGATTA AAGAAGTCGA GCGCCGCCTG 
CGCGTTCAGG AACAGGTGAT TAAGTTCATC ACCGTGCGCG TGGACGAAGA GCAGAAGCGT 
TTGGCGAAGG TGAAGGCGAT CCGCGACACG AAGGTTCGTG GCAAGGGTAC GCGAGCGGCC 
GAGCAGGCTG CAGCGGCGGA AGCGGCTGCA CCGGCAGCGG CTCCGGCTGA GCCGGCGAGT 
GCGGAACCGG CGCCGGCTGT CTAG 

 

Protein sequence

MQRTYEVMFI VRPDLTDEDL DKLVSTLETQ VGTAGGTIKS VDKMGKRRLA YEVSTFTDGM 
YILFTIEGEG ALIKEVERRL RVQEQVIKFI TVRVDEEQKR LAKVKAIRDT KVRGKGTRAA 
EQAAAAEAAA PAAAPAEPAS AEPAPAV