| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4475 |
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| Symbol | |
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| ID | 4070958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5309657 |
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| End bp | 5311387 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986514 |
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| Product | DNA ligase I, ATP-dependent (dnl1) |
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| Protein accession | YP_593549 |
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| Protein GI | 94971501 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTC TCGCCCAAAC CTGCGAGGCC ATAGCCGCCA CCTCTAAAAA GACGGAAAAG
ATCGCCATCG TCGCGACGTA TTTACAGTCG CGGACGGTGC CGGAAGCTGC GCTGTCGACG
CTGTTTCTCT CGGGGCGGAC TTTTGCGGCG CACGAAGAGC GCACCCTGCA GGTCGGCGGA
TCGATCCTGT GGCGCGTGGT GGGCGAGCTT TCTGGTGCGA GTGAAGCCAA GATGACCGCG
GCTTACAAAC GGCACGGCGA TCTTGGCGAT GCCACGCTCG GGGTGTTGCG CGGGGTTGCG
CCTGAAGAAA GCACTCTCAC GCTGAAAGAA GTGGATTACA TGTTCCAACA GATTGCGGCT
GTCAGCGGTC CGGCAGCGAA ATCGCGGCTG ATCGTGACGC TGCTCGCGCG GGCGACGGCA
CCGGAAGCGA AGTACCTCGT CAAGTTCATC ACCGGCGAGT TGCGCATAGG ATTGAAGGAA
AGCCAAGTCG AAGAGGCGAT CGCCAAGGCG TATGGTCGCG AACTCGCGGA AGTGCGGCGC
GCCAACATGC TGGTCGGGGA CATCGGCGAA ACGCTGGTGC TGGCCGCGCA TGACAAGCTT
GCGACTGCGC GGATGCGACT CTTCCACCCG ATGGGATTCA TGCTCGCCAC TCCGGCAGAG
AGTGCGAACG AAGCCTTCGC GGAATTCGAG CACGCCATCG TCGAAGACAA GTACGACGGT
ATCCGCGCGC AAGCGCATAT CTCGCGAGAC AAAGTGCGGA TCTTTTCGCG AACTCTCGAC
GACATCACCG ATTCCTTCCC CGAACTCATT CCCGCCCTGA AAGCGATCGA GCACGAAGTC
ATCCTCGATG GCGAAATCCT CGCGTGGCGC TGCGGCCAGG CGCTAGCGTT CAGCGAATTG
CAGAAGAGAC TTGGGCGCAA GAACGTTTCG GCAGCCATGC AGCGCGAAGT GCCGGTGAGC
TACGTCACAT TCGATTTGCT TTATGCGAAG GGCCAGTTGG TGATTGATCG TCCGCTGCAG
GAGCGCGCGG CGATGCTGGA TGGAATCTTT TCGGAAGGTG CACCGCGATT GGTCAACGTT
GATCCGCACG GTCAGGCGTC ATTGATGTTT GCCGAAGTTA CACCAGAGCA AAGGGTATTG
CGCGCACCGC AGGCACGAGC GGATTCCCCC GAAGAGCTCG ATCGCCTGTT CGCAGCCGCT
CAGGAACGCG GCAACGAAGG GCTGATGATC AAAGACATTC ATTCGGCCTA CGCGGTCGGG
CGCCGCGGCA AATCGTGGCT GAAGCTGAAG CGCGAGCTGG CAATGCTGGA CGTCGTTGTG
ACCGCAGTCG AACTCGGACA CGGCAAACGG GCGGGCATCC TGAGCGACTA CACCTTCGCC
GTGCGCGGTG GTGAAGAACT ATTGAACATC GGCAAAGCCT ACTCCGGGCT TACGGACAAA
GAAATCGCGG AGATGGACGA GTGGTTTCGG GCTCACACCC TGGTCGATCA TGGCTTCGTT
CGTGAGGTCG AGCCCAAGAT CGTCATCGAA GTGGCGTTCA ACGCGGTGAT GAAGTCCGAT
CGCCATGCCA GCGGATTTGC CCTGCGGTTC CCGCGAATTC TGCGCATTCG CGATGATAAG
GGGGGCGAAG AGATCGACAC GCTGGAGCGT GCTGAGGAGA TTTACCGGTC GCAGTTTCAC
CAGCGCACGC GACGTATTCA CCGCGGAGAC ACAAAGGCGC AGAGTTCTTA G
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| Protein sequence | MQLLAQTCEA IAATSKKTEK IAIVATYLQS RTVPEAALST LFLSGRTFAA HEERTLQVGG
SILWRVVGEL SGASEAKMTA AYKRHGDLGD ATLGVLRGVA PEESTLTLKE VDYMFQQIAA
VSGPAAKSRL IVTLLARATA PEAKYLVKFI TGELRIGLKE SQVEEAIAKA YGRELAEVRR
ANMLVGDIGE TLVLAAHDKL ATARMRLFHP MGFMLATPAE SANEAFAEFE HAIVEDKYDG
IRAQAHISRD KVRIFSRTLD DITDSFPELI PALKAIEHEV ILDGEILAWR CGQALAFSEL
QKRLGRKNVS AAMQREVPVS YVTFDLLYAK GQLVIDRPLQ ERAAMLDGIF SEGAPRLVNV
DPHGQASLMF AEVTPEQRVL RAPQARADSP EELDRLFAAA QERGNEGLMI KDIHSAYAVG
RRGKSWLKLK RELAMLDVVV TAVELGHGKR AGILSDYTFA VRGGEELLNI GKAYSGLTDK
EIAEMDEWFR AHTLVDHGFV REVEPKIVIE VAFNAVMKSD RHASGFALRF PRILRIRDDK
GGEEIDTLER AEEIYRSQFH QRTRRIHRGD TKAQSS
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