| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4406 |
|---|
| Symbol | |
|---|
| ID | 4073312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5231450 |
|---|
| End bp | 5234281 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637986439 |
|---|
| Product | peptidase M16-like |
|---|
| Protein accession | YP_593480 |
|---|
| Protein GI | 94971432 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTT TCCGTCGTTT GTTTGCCATT CTCTTGCTCG CAGCACCGCT GCTCGCGCAA
TCCAAGCTCA ACGTTCCCAC CATCGCTTAC GAGCAGTACA AGCTACCCAA CGGCCTCCAG
GTGCTGATGG TCGAAGACCA TCGCCTGCCG CTGGTTGGCG TGGATCTCTG GTATCACGTC
GGCCCGGTGA AGGAGAAGGA AGGCCGCACC GGATTCGCGC ACCTCTTCGA ACACATGATG
TTCGAGGGCT CCAAGCACGT CGGTGAGAAG GCGCACTTCA AGTACCTCGA AGCTGCCGGC
GCCAGCGACA TCAACGGCAC TACCGATTTC GACCGCACCA ATTACTTCGA GACGCTGCCC
GCGAACCAGC TAGAACTTGC GCTCTGGCTC GAAAGTGACC GTATGGGCTT CCTGCTCGAC
ACCCTCGATC GCACCAAGCT CGCCAACCAG CGCGACGTGG TCCGCAACGA ACGGCGTCAG
AGCGTGGAAG GCCAGCCTTA CGGCATTGCC GAAGAGCTGA TGTTCCACGA GCTCTATCCC
AAGGGCCATC CCTACTACGC TTCCGTAATT GGCTCGCATG CCGATGTAGA AGCCGCGCGC
CTCAACGACG TCCGCGAGTT CTTCAAGCAG TACTACACGC CCAACAACGC CACCCTGGTC
ATCACCGGCG ACATCAGCAA GCCCGCGGCG AAAGCGCTCG TCGAAAAATA CTTTGGCCCC
ATCCCGCAAG GCCCGCCGGT AGAAGCCGTC AACATCAAGA CGCCGCCGAT CACGCAGGAA
AAGCGCCTCA ACGTAACCGA CCAGGTACAG CTTCCAAAGG TTCTGCTCGG ATGGCTCGCG
CCCGCAGCCT TCGCGCCCGG CGACGCGGAA ATGATTCTCG CCAACCAGAT CCTTGGCGGC
GGCAAATCGA GCCGCCTCTA TCGCAAGCTC GTTTACGAAC AGCAAATCGC GCAGGACGCC
ACTTGCTTCC AGGAATCGCT CGCCCTCGGT TCGCCGATGG GCTGCGAAAT CACCGCCAAG
CCCAATGTCA CGCCTGAGCA GATCGAGAAA GCCACGAACG ACGTGATGGC TGACTTCCTC
GCCAATGGCG CAACGCAAGC CGAACTTGAT CGCGCTCGCA CCACGATCGA AGCCCGCAAG
ATCCGCAACC TCGAGCGTCT TGGCGGCTTC GGCGGCGTCG CTGACATGCT GAACTACTAC
AACCAGTACG TCGGCGATCC CGGCTACCTG CCCAAAGACA TCGCGCGTTA TGACGCCGTG
ACTCCCGAGT CGCTGCTCGC GACCGCGAAG TCCACCCTGC AGCAAAACCA GCGGGTCACG
ATGTTCTGCA CGCCGGGCAA AAAAGTTGTG GACGACGTTC CCCGCAGCCC CGAGAACACT
GACGCCGATG TGAAGGTCGA GCCCGAGTAC ACCGCGGAGT TCGACAAGGC GCAGGCGTGG
CGCGCCACCG CGCCCAAGGC CGGGCCACTG CCCAAGCTGC AACTGCCAGT GCCTGCCGAG
TTCAAGCTCG ACAACGGCCT GAAGGTTTAC CTCGTGCCCG ACCACTCGCT GCCGCTGCTA
GCTATGCGCG TGATGTCGCT TGGCGGCTCC GACGCGAATA CCCATGAGAA GTCCGGTGTC
GCAGGCTTCA CCGCCGCCAT GCTCACCGAA GGCACCGCCA ATCGCACGGC GCCGCAGATC
GCCGATGAGA CCGATAAGCT CGGCGCCACG CTCAACACCG GCGCAACATT CGATAACGCT
GCCGTCTCCA TGAGTGTGCT CAGCAACAAC ACCGACCCCG CGATTGACCT TCTCTCTGAC
GTCGTGCTGC ATCCCAAGTT CGACGCTAAG GAAACCGATC GCATTCGCAA GGAGCGCCAG
ACCGGGCTCA TCCAACTCCG CGACGATCCC TTCCAACTCG CAATTCGCGT TGGCAATCGC
GCCGAGTTCG GTACCCAGAG TCCGTACGGC GAAATCGAAC TCGGCACTCC CGAGTCGTTG
AAGTCCACCA CCAGCGACGA CCTAACGAAC TTCTGGAAGT CGCACTACAC CCCCGCGAAC
TCGGCGCTCA TCTTCTCCGG CGACATTACC GAAGCGAAAG CGCGCGAGCT CGCGAAGAAA
TACTTCGGCG CATGGACGGC GAAGGGAAGC GCAACCGAGC CCCCAAAGAC GGTCACCGCG
CAATCGCGCA AGATCGTCCT CGTCGATCAG CCCGGCGCGC CGCAGTCGGT CATCCTCGCC
TACGGCGTTG GTGTTCCGCG CAGCAATCCC GACTATCCCG CAATTACCGT GATGAACACC
ATGCTTGGCG GCCTGTTCTC GTCGCGCATC AACATGAACC TGCGCGAAAA GAACGGCTTC
ACCTACGGTG CCTTCTCGGC GTTCTCGTGG CGTCGCGGCG CTGGCCCGTT CTTCGCCGGC
TCCCAGGTCC GTACTGATGT CACCGCCCCC GCCGCGCGTG AACTCTTCGC CGAACTCGAC
GGCATCCGCA CTCGTCCGCT CACGGCCGAT GAGTTGAAGA TGTCGAAGGA CAGCGTCATC
CGTTCGCTGC CCGGCGACTT CGAAACCCGT GCCGCGGTGG CTGCCGGTGT CGGCAACATC
TGGACCTACA GCCTCCCGCT GGACTACTAC CGCCAGATCG AAGGCAAGAT CGAAGCCGTC
ACTGCGGAAG ATACGTCGCG TGTCGCGAAG CAATACGTCC AGCCCGATAA GCTCCTTCTC
GTCACCATCG GCGACAAAGC AAAGATCGAA TCCGGTCTGC AAGAGTTGAA GTTAGGCCCC
ATCGAGCTCT GGACCAGCGA CGCCGAACCC ATGTCAGCAG GCTCCGCCGC CGGAGGCAAT
AAAGCGCAGT AA
|
|---|
| Protein sequence | MTSFRRLFAI LLLAAPLLAQ SKLNVPTIAY EQYKLPNGLQ VLMVEDHRLP LVGVDLWYHV
GPVKEKEGRT GFAHLFEHMM FEGSKHVGEK AHFKYLEAAG ASDINGTTDF DRTNYFETLP
ANQLELALWL ESDRMGFLLD TLDRTKLANQ RDVVRNERRQ SVEGQPYGIA EELMFHELYP
KGHPYYASVI GSHADVEAAR LNDVREFFKQ YYTPNNATLV ITGDISKPAA KALVEKYFGP
IPQGPPVEAV NIKTPPITQE KRLNVTDQVQ LPKVLLGWLA PAAFAPGDAE MILANQILGG
GKSSRLYRKL VYEQQIAQDA TCFQESLALG SPMGCEITAK PNVTPEQIEK ATNDVMADFL
ANGATQAELD RARTTIEARK IRNLERLGGF GGVADMLNYY NQYVGDPGYL PKDIARYDAV
TPESLLATAK STLQQNQRVT MFCTPGKKVV DDVPRSPENT DADVKVEPEY TAEFDKAQAW
RATAPKAGPL PKLQLPVPAE FKLDNGLKVY LVPDHSLPLL AMRVMSLGGS DANTHEKSGV
AGFTAAMLTE GTANRTAPQI ADETDKLGAT LNTGATFDNA AVSMSVLSNN TDPAIDLLSD
VVLHPKFDAK ETDRIRKERQ TGLIQLRDDP FQLAIRVGNR AEFGTQSPYG EIELGTPESL
KSTTSDDLTN FWKSHYTPAN SALIFSGDIT EAKARELAKK YFGAWTAKGS ATEPPKTVTA
QSRKIVLVDQ PGAPQSVILA YGVGVPRSNP DYPAITVMNT MLGGLFSSRI NMNLREKNGF
TYGAFSAFSW RRGAGPFFAG SQVRTDVTAP AARELFAELD GIRTRPLTAD ELKMSKDSVI
RSLPGDFETR AAVAAGVGNI WTYSLPLDYY RQIEGKIEAV TAEDTSRVAK QYVQPDKLLL
VTIGDKAKIE SGLQELKLGP IELWTSDAEP MSAGSAAGGN KAQ
|
|---|
| |