Gene Acid345_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4396 
Symbol 
ID4073302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5221271 
End bp5223739 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content61% 
IMG OID637986429 
ProductTPR repeat-containing serine/threonin protein kinase 
Protein accessionYP_593470 
Protein GI94971422 
COG category[R] General function prediction only
[L] Replication, recombination and repair
[T] Signal transduction mechanisms
[K] Transcription
[S] Function unknown 
COG ID[COG0515] Serine/threonine protein kinase
[COG5616] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC AAACCGTCTC GCACTATCGC ATCGTGGAAA AACTCGGCGG CGGCGGCATG 
GGCGTGGTTT ACAAGGCCGA GGACACGCGC CTGCATCGCT TTGTGGCCCT CAAGTTCCTG
CCCACGGAAC TGGCGAAGGA CCCGCAGGCG CGGGCCCGTT TCGAGCGCGA AGCCCAGGCC
GCCTCGGCGC TCAATCATCC CAACATCTGC ACCATCTACG ACATCGGTGA CGACAACGGC
CAGGGCTTCA TCGCCATGGA GTTCCTCGAG GGCGTAACCC TCAAGCATCG GATCACGACC
AAGCCGATGG AGACCGGCGA GATCGTCACC CTTGCGATCG AAATCGCAGA TGCCCTCGAC
GCCGCCCACG CCAAGGGCAT CGTTCATCGC GACATCAAGC CCGCCAACCT CTTTATTACC
GATCGCGGCC ACGCCAAAGT CCTCGACTTC GGTCTCGCCA AAGTGACCGC GACAAAATCC
GCAGTGGCCG TGGAAAACGC TCCGACGACC ACCGTCGACG AACATCTCAC CAGCCCCGGC
AGCACTCTTG GCACGGTCGC CTACATGTCG CCCGAGCAGG TGCTTGCGAA AGACCTCGAT
CCGCGCACCG ACCTTTTTTC CTTCGGCGTG GTTCTGTACG AAATGGCCAC CGCCACGCTG
CCGTTTCGCG GCGACAGCAG CGGCGTCATC TTCGACGCCA TTCTGCACGC CGAGCCGGTG
CCCGCCGTAC GTCTCAATCC CGATGTCCCC GAAAAGCTCG AAGACATCCT CGCGAAGCTG
CTGGAAAAAG ACCGCGACGT CCGCTATCAA TCCGCCGCGG AACTCAAAGC CGACCTCAAG
CGCCTGCAAC GCGACAGCGA ATCGCAGCGC TTCCGCGTCA CCTCCGGCGA GAGCATCGCA
AGAAAGCCGC AGCCCGTTCG CCGCAAGACC ATGGTCGAGA TTGCTTCGGT TGTCGCCGTG
CTGCTGGTGA TCATCGGCTT CGCTGCCTAT CACTTCCTCG CGCCGACGAA GCACGATTCC
GCGCAGACCA GCAGCGCCAA GCCCACGGTC GAATCCATCG CCGTCCTCCC TTTCCGCGAC
CTTGCTTCTT CAGCTGGAGA TAGTTGGGCC ATCGGCATCA CTGACGCCAT CATCAGCCGC
CTCACTTCGC TGAAGAATCT CGCCGTACGA CCTACGACGT CGGTCATGAA GTACGCGAAG
GAAACGCCCG AGGCCACCGA GGCCGCGAAA GCCCTCCAAG TAGATTCGAT CCTCGAAGGC
ACCTACCAGC GCACGCCCGA CGTCACACGA GTCACCGTGC AGTTGATTGA CGGCCGCACC
GGCACCACCA AGTGGTCGCA GCGCTACGAT CTGCGCAGCG CCGACATCCT AACCTTCGAA
GACCAGGTCG CCGCCAAAGT TGTGGAAGGC CTGCAAATCG AGATCTCGCC GAAAGAGCAG
CAGAACATCC AGCAGCAGCT GACCGCGAAC GTCGATGCCT ACAACGACTA TCTCCAGGGC
CGCGCGTATT ACAACGAGTA CCTCGAGACC TCGCAACTCG ACAGCCTCGA GAAATCGCAG
GCCGTGCTGA AGCAGGCCAT CGCGCTGGAT CCCAATTTTG CTGACGCCTA CGCCGCTCTC
GCGCAGGCTT ATCAGTTCCA GGCTGCGAAT TTCCTCCACG ATGCCAAAGC CAATCTCCAG
CGCGGAAGGG AAGCGTCGCT CCAGTCGCTC AAAATCAAAC CCGATTTTGC GGAAGGCCTC
GTCGCGCTCG CGGGAGGCTA TGCGGAAGAA GGCCGTCTCG CGGAAGGTAT CCGAGCCAGC
CGTCGCGCGG TGGAACTTGC GCCCAACAGC CCTTCCGCCT GGCAGATACT CGCCTACAAC
TATTACTACG CTGGTCTCAA CGACCAGGCC GCGGAAGGTT ACGCACGGCT TGTGCAGTTG
GACCCGGGCC CGCCACAACC ACACTGGATG CACGCGCGCA TGCTCCTCTA CTCCGGTAAA
GCCGAGGCCG CGGAGCAGGC CATGCGCGAC ACCGTGGCGC GCTTCCCCAA CCAATTCAAG
GTACTTGGCT ACTACGGTTC TTTCCTTTAT TACGAAGGCA AACTCGACGA AGCACAGGGC
TACCTCGATC GCGGGGTCCA GCTTTCGCAG AACGTCGACG ATGATTCCCC CCGCATGATG
GCCGGGTTCC TCTACGCCTC GCGCAAGCAA CGCGACAAGA TCGCCCCGCG ACTGTTCCAC
TACACCCCGG ACCAGGTGAT CGACGCCGAC GCAGCCCACT GGATCGCCGG CATCTACGCG
CTCCTCGGCG AACGCGACAA AGCCATCCTC TGGCTCAAGC GTTCCATCGA ACTCGGCGAC
ATCAACTATC CCTGGTACGT GCGCGACAAA AACTTCGACA GCCTGCGCTC CGACCCCGAG
TTCCAAAAAA TTCTCGACGG AGTCCGCGTA CGCCACGAAG CTATAGCGAA AGAATTCGCG
CAGCCGTAA
 
Protein sequence
MIGQTVSHYR IVEKLGGGGM GVVYKAEDTR LHRFVALKFL PTELAKDPQA RARFEREAQA 
ASALNHPNIC TIYDIGDDNG QGFIAMEFLE GVTLKHRITT KPMETGEIVT LAIEIADALD
AAHAKGIVHR DIKPANLFIT DRGHAKVLDF GLAKVTATKS AVAVENAPTT TVDEHLTSPG
STLGTVAYMS PEQVLAKDLD PRTDLFSFGV VLYEMATATL PFRGDSSGVI FDAILHAEPV
PAVRLNPDVP EKLEDILAKL LEKDRDVRYQ SAAELKADLK RLQRDSESQR FRVTSGESIA
RKPQPVRRKT MVEIASVVAV LLVIIGFAAY HFLAPTKHDS AQTSSAKPTV ESIAVLPFRD
LASSAGDSWA IGITDAIISR LTSLKNLAVR PTTSVMKYAK ETPEATEAAK ALQVDSILEG
TYQRTPDVTR VTVQLIDGRT GTTKWSQRYD LRSADILTFE DQVAAKVVEG LQIEISPKEQ
QNIQQQLTAN VDAYNDYLQG RAYYNEYLET SQLDSLEKSQ AVLKQAIALD PNFADAYAAL
AQAYQFQAAN FLHDAKANLQ RGREASLQSL KIKPDFAEGL VALAGGYAEE GRLAEGIRAS
RRAVELAPNS PSAWQILAYN YYYAGLNDQA AEGYARLVQL DPGPPQPHWM HARMLLYSGK
AEAAEQAMRD TVARFPNQFK VLGYYGSFLY YEGKLDEAQG YLDRGVQLSQ NVDDDSPRMM
AGFLYASRKQ RDKIAPRLFH YTPDQVIDAD AAHWIAGIYA LLGERDKAIL WLKRSIELGD
INYPWYVRDK NFDSLRSDPE FQKILDGVRV RHEAIAKEFA QP