| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4395 |
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| Symbol | |
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| ID | 4073301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5218449 |
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| End bp | 5221088 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637986428 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_593469 |
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| Protein GI | 94971421 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC GCCGGTTCTT CCTACGCAGC CGTCGTGATG CCGAGGTCAC GCAGGAAATC
CAGACACACA TCGCGGAAGA AACCGCGGAA AACGTGGCGC GCGGGATGTC GGCGGAAGAA
GCGCGGCGGC GCGCATATCT CAAGTTTGGT AATCCGGAGA TTGTTCGCGA GCAGGTGTGG
CAGCAGAACA CGCTGACCCT GCTCGACAGC CTGTGGCGCG ACCTGAAGTA TGCCGCGCGA
TCGTTGCGAC GCGCGCCTGC ATTTTCGGTG ATGGCGATCT TCGTGATGGC GCTCGGCATT
GGCGGAACCG TCGCAATGTT TACCGTGGTG CGCAATGTGC TGCTCAATCC GCTGCCGTAT
CCGGAGTCGC AAAACCTTTA TGCGCTGTGG GAGCACGAGG ACACCGGTAA TTTCAGCCCG
AACCTTCCTG TGGCGGGCGG AAGTTTTCTG GAGTGGCAGA AGGCGGCCAA GGGGTCGGCG
GAGCTGGCGC TGGTTTCGCC GTGGCAGGGC TACAACGTTT CGGCCGAGGG CGGCAAGCTG
CCCGAGATGA TTGACTCAGC AAGCATCTCG TGGAATTTCT TTCGTGTGCT CGGGGTACAG
CCCGCACTGG GGCGCGACTT CACCGCCGAC GACGATCGCA AGGAAGCGCC GGCCACGGTG
ATTCTCGCGC ACTCGTTCTG GGTGCGGCGC TACAGCCACG ATCCCAACAT TTTGGGGAAG
AGCATTTACC TCGACGCCAA GCCCTACACC GTGATCGGCG TGCTGCCGGA GTCATTCACG
TTCTCGAGTG CGATGTCGCA AAGCAACGCG CAGGCGGTGT GGACGACGGT CGGCCATGAG
ATGCCGGAGT TGCTCTCTAT CTACGATGAC CACGAATTCT TCGGTGTCGC GCGCCTGGCG
AAGGGCGTGA CCTTCGCGCA ACTGATGAGC CGCGTGGATA CGGCGCAGAA GCAGGTGAAG
GCCGAGCATC CGGGGGCGGC GGTGCATCCC GGCGCGATCG GCCACAGCAT GCTCGATGAT
GCGGTGGCGA AATACAAGAC CCCGTTCTAT GCTCTGCTCG CGGCGACCCT GTGCGTGTTG
CTGATCGCGT GCCTGAACGT GGCCAGCTTG CTGGTGGCGC GCATTGCCGC GCGCAGCAAA
GAACATGCGA TCCGCGCCGC GCTCGGCGGC AGTCGCTTGC GCCTGTTGCG CGAACGGCTC
ACGGAGAGCT TGCTGCTCTC TACCGCCGGC GGTGCGATCG GCGTGTTGAT GGCGTGGGGT
GCTCTGCGCT GGCTGGTGCT TACGCGTCAC GACATCAACC GCATTGAGAC GATCCATCTC
GACGGCTTCG CTTTCGCGTT CTCAGTGGGT GCGGTGTTGT TTGCCGCGTG CTTCTCGGCG
CTGATTGCGT GGATGAGCGC GGACGACAAG CGCATTCTCG CGACGTTGCA GGAATCGTCG
CGTTCGCACA GCGCGGGCGG AAAGCGCGCT ACGCTGCGGC GCGTGCTGCT GGTGGGTGAA
GTGGGACTGA CCGTAGTGCT GCTGGTTGGC GCGGGACTGT TGCTCAAGAG TTATCTACGG
TTGCGCAGCA CCGACCTCGG CATTCCCGTG GACAACGTGC TCACACTGCG CGTCATCCTT
CCCGATGCGC GCTACAGCGG CGACGCCAAG CCGGCGGCGT TCTTCGAACA ACTGTTGCAG
CGCGTGAAGA CGGTGCCGGG CGTGGAAGCG GCAGCGCTGA TCAGTCGTGC GCCAGGCCAG
GGATGGGGCG GCGATTCACT GATGACGGTT GTCGAGCATC CGCCGCTGCC CAAGGGCGTG
GGACTCGATT TGCAGCGGCG TGGCGCCGAT CCCGGATACT TTGCGGCGGC GAAAGTTCCG
ATGCTTAAGG GGCGCACCTT CCGCGACGAT GAGCGCCTCG ATCATGCGCA GGTACTCATT
CTCAGCGAAT CGGCCGTGAA ATTGTGCTTC CCCGCTGGCG ATGACCCGAT CGGCAAGCAC
ATGACGTTCG GCGACCAGAA AAAAGCGTAC GAGGTGATTG GCGTGGTGGG CGACACGCGT
TGGGACATCA CGACGCCCGC GATGCCCACG TTCTACCTGC CTATTTACAG CCACGCATAT
ACCGGCACGA CGGTGATGGT GCGGGCGTCG CACAACGTGG AGTCGCTGGC GATGCCGATC
CAACGCATCA TTGGCGAGAT GGATCCGGAC CTGCCAGTTT CCGGCGTGCT GACGCTTCAG
CAGACGATTA GTCGTTCCAC GATGTCCTCG CAATTCGACT CGCTGCTGGT GCTGGCATTT
GCTGCGATCG CGCTGGTACT GGCGGCGGCC GGTCTCTACG GGGTGCTCGC GTATCTCGTC
ACGCAGCGCA CCGGCGAGAT CGGCGTGCGA ATTGCACTCG GCGCGCGGCG TGAGCAGGTG
CTGGGGATGG TCCTTGTGGA TGGTCTGCGG CCAGCGCTGT TGGGGCTGGT GCTTGGGTTG
GCGGGGAGTG CGGCAACGGC GAAGCTGATC GAATCCATGC TCTACCAGAC GAAGCCGTTC
GATATCCCAG TGTTCGCCGC TGTGATCGTT ACACTGCTGG CGATGGCGGC GCTGGCGTGC
CTGTATCCGG CGTGGCGAGC GTCACGGCTG GATCCGGCAC AGGCTCTGCG AATGGAATAG
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| Protein sequence | MTPRRFFLRS RRDAEVTQEI QTHIAEETAE NVARGMSAEE ARRRAYLKFG NPEIVREQVW
QQNTLTLLDS LWRDLKYAAR SLRRAPAFSV MAIFVMALGI GGTVAMFTVV RNVLLNPLPY
PESQNLYALW EHEDTGNFSP NLPVAGGSFL EWQKAAKGSA ELALVSPWQG YNVSAEGGKL
PEMIDSASIS WNFFRVLGVQ PALGRDFTAD DDRKEAPATV ILAHSFWVRR YSHDPNILGK
SIYLDAKPYT VIGVLPESFT FSSAMSQSNA QAVWTTVGHE MPELLSIYDD HEFFGVARLA
KGVTFAQLMS RVDTAQKQVK AEHPGAAVHP GAIGHSMLDD AVAKYKTPFY ALLAATLCVL
LIACLNVASL LVARIAARSK EHAIRAALGG SRLRLLRERL TESLLLSTAG GAIGVLMAWG
ALRWLVLTRH DINRIETIHL DGFAFAFSVG AVLFAACFSA LIAWMSADDK RILATLQESS
RSHSAGGKRA TLRRVLLVGE VGLTVVLLVG AGLLLKSYLR LRSTDLGIPV DNVLTLRVIL
PDARYSGDAK PAAFFEQLLQ RVKTVPGVEA AALISRAPGQ GWGGDSLMTV VEHPPLPKGV
GLDLQRRGAD PGYFAAAKVP MLKGRTFRDD ERLDHAQVLI LSESAVKLCF PAGDDPIGKH
MTFGDQKKAY EVIGVVGDTR WDITTPAMPT FYLPIYSHAY TGTTVMVRAS HNVESLAMPI
QRIIGEMDPD LPVSGVLTLQ QTISRSTMSS QFDSLLVLAF AAIALVLAAA GLYGVLAYLV
TQRTGEIGVR IALGARREQV LGMVLVDGLR PALLGLVLGL AGSAATAKLI ESMLYQTKPF
DIPVFAAVIV TLLAMAALAC LYPAWRASRL DPAQALRME
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