Gene Acid345_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4341 
Symbol 
ID4071759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5150816 
End bp5151106 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID637986374 
Producthost factor Hfq 
Protein accessionYP_593415 
Protein GI94971367 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AGCCCGCACA GAATATCCAG GATTCGTTTC TCAACACAGC CCGCAAGGAC 
AAAACGATTG TCACGATTTA CCTGCTTAGC GGCGTGAAGC TGACGGGCAG GATCCGTTCT
TTTGACAAGT ATTCGGTCGT CCTGGATACC AACAACCAAG AACAACTGAT TTTCAAGCAC
GCGATTTCGA CGGTGGTGTT GCCGCGGCCG GCCCATGGCG CGGATGTGCG GCACTCCGAT
GCGAAGCCGG TAGGCACAAC CAGCCCGGCG ACCCAAACGA CGGAGGGTTA G
 
Protein sequence
MENKPAQNIQ DSFLNTARKD KTIVTIYLLS GVKLTGRIRS FDKYSVVLDT NNQEQLIFKH 
AISTVVLPRP AHGADVRHSD AKPVGTTSPA TQTTEG