Gene Acid345_4326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4326 
Symbol 
ID4071744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5135678 
End bp5136475 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID637986359 
Productbeta-lactamase-like 
Protein accessionYP_593400 
Protein GI94971352 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.111759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.502915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGTTA CGGTGCTTGC GAGTGGCAGC CGAGGCAATA GCACGGTTGT CGCCAGCTCC 
AGCACCAGCC TGCTGGTGGA TGCCGGACTT TCCTGTAAAG AGACCCTGAT TCGACTACGC
GCTTCGGGAT GCGATCAGAC CTCGTTGAGC GCGATACTCA TCACCCACGA ACATAGCGAC
CACATCGCGG GACTGAATGT TCTCGCGAAG AAACTGCGCA TCCCCGTCTT CATTACGGCA
TCTACTCAAC GTGCTTACCT GCGCATGGCT CGGGATAGCC AAGGGAACAA AGTGCGCCTG
GAACGCGTAG AGAACTTTGA AGCGGGACGA AGCTTCCAGA TTGGCGACAT CGCGATAACG
CCATTCACGA TTCCTCACGA TGCGGCGGAC CCGGTAGGGT TCACGTTCCG CGCGGAAGGT
ATCAAGGCAG CGATTGCCAC CGATTTGGGC TATATGCCCG TGAGCGTGAA GGACCATATC
CGCGGTTGCC AAATGCTGGT GGTGGAGTCT AATCACGATG TGGAGATGTT GAGGATCGGG
CCTTATCCAT GGTCGGTGAA GCAGCGAGTG ATGTCGCGCG TAGGGCATTT GTCGAATGAC
GCGCTCGCGG ATTTCATTGT CAACGACTAT GATGGAGGGG CAGAGTATCT GATCCTGGCG
CACCTATCGG AGCAGAATAA CCACCCCGAG GTGGCTCGCA CCGCGGCGGA GCGTGCGCTG
GACAGGCACG GCAACTTATT TGGGAACAAG CTGATGTTGG CCCGCCAGGA CCAGCCACTG
CAGACGGTAA CTCTCTAG
 
Protein sequence
MSVTVLASGS RGNSTVVASS STSLLVDAGL SCKETLIRLR ASGCDQTSLS AILITHEHSD 
HIAGLNVLAK KLRIPVFITA STQRAYLRMA RDSQGNKVRL ERVENFEAGR SFQIGDIAIT
PFTIPHDAAD PVGFTFRAEG IKAAIATDLG YMPVSVKDHI RGCQMLVVES NHDVEMLRIG
PYPWSVKQRV MSRVGHLSND ALADFIVNDY DGGAEYLILA HLSEQNNHPE VARTAAERAL
DRHGNLFGNK LMLARQDQPL QTVTL