Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4326 |
Symbol | |
ID | 4071744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5135678 |
End bp | 5136475 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986359 |
Product | beta-lactamase-like |
Protein accession | YP_593400 |
Protein GI | 94971352 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.111759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.502915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGTTA CGGTGCTTGC GAGTGGCAGC CGAGGCAATA GCACGGTTGT CGCCAGCTCC AGCACCAGCC TGCTGGTGGA TGCCGGACTT TCCTGTAAAG AGACCCTGAT TCGACTACGC GCTTCGGGAT GCGATCAGAC CTCGTTGAGC GCGATACTCA TCACCCACGA ACATAGCGAC CACATCGCGG GACTGAATGT TCTCGCGAAG AAACTGCGCA TCCCCGTCTT CATTACGGCA TCTACTCAAC GTGCTTACCT GCGCATGGCT CGGGATAGCC AAGGGAACAA AGTGCGCCTG GAACGCGTAG AGAACTTTGA AGCGGGACGA AGCTTCCAGA TTGGCGACAT CGCGATAACG CCATTCACGA TTCCTCACGA TGCGGCGGAC CCGGTAGGGT TCACGTTCCG CGCGGAAGGT ATCAAGGCAG CGATTGCCAC CGATTTGGGC TATATGCCCG TGAGCGTGAA GGACCATATC CGCGGTTGCC AAATGCTGGT GGTGGAGTCT AATCACGATG TGGAGATGTT GAGGATCGGG CCTTATCCAT GGTCGGTGAA GCAGCGAGTG ATGTCGCGCG TAGGGCATTT GTCGAATGAC GCGCTCGCGG ATTTCATTGT CAACGACTAT GATGGAGGGG CAGAGTATCT GATCCTGGCG CACCTATCGG AGCAGAATAA CCACCCCGAG GTGGCTCGCA CCGCGGCGGA GCGTGCGCTG GACAGGCACG GCAACTTATT TGGGAACAAG CTGATGTTGG CCCGCCAGGA CCAGCCACTG CAGACGGTAA CTCTCTAG
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Protein sequence | MSVTVLASGS RGNSTVVASS STSLLVDAGL SCKETLIRLR ASGCDQTSLS AILITHEHSD HIAGLNVLAK KLRIPVFITA STQRAYLRMA RDSQGNKVRL ERVENFEAGR SFQIGDIAIT PFTIPHDAAD PVGFTFRAEG IKAAIATDLG YMPVSVKDHI RGCQMLVVES NHDVEMLRIG PYPWSVKQRV MSRVGHLSND ALADFIVNDY DGGAEYLILA HLSEQNNHPE VARTAAERAL DRHGNLFGNK LMLARQDQPL QTVTL
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