Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4297 |
Symbol | |
ID | 4071870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5105513 |
End bp | 5107435 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986330 |
Product | DNA primase |
Protein accession | YP_593371 |
Protein GI | 94971323 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.624136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGTCC ATCTTTGCGT AACGCCGCGC CTTAAGCGCA CACTCAAGTC CGTGGCCAAT CCCGGCGATT TTGCATACGA CTTGAAACAG CAGGCGGACA TCGTTCGCGT GATCGGCGAA TACGTCCAGC TGCGCAAGGC CGGGGCGCAG AATTACGCGG GCCTGTGCCC ATTCCACAAC GAAAAGTCAC CGTCATTTTC CGTACATCAA TCGCGCCAGT TCTTTCACTG TTTTGGCTGC GGAGCTTCGG GCGACGTCTT CACCTTCATT CAGAAAATTG AGAACATTAC GTTCCCGGAA GCGGTTCGCT CGATCGCCCA AAAGCTTGGT GTGCCGATGC CGAAAGTGGA GTACGCATCG CCGCAGGAAG CGCGCGAAGC CAAGATGCGC GGCGCGCTTC TCGACGCCAA CGAATTGGCA TGTGCGTGGT TCCAGGAGCA ACTTCGCAAG CCGGATGCGG CGCATGCGCG TGAGTATCTG AAGTCGCGCG GATTGGATGC GGAGACGGTC GAAAAGTTCC GCATCGGATT TGCGCCGGAG TCAGGCTTCC TGCTGCGCGA CCGCATGAAA GGCGAGTTCA ACGAAGAGAT CCTGCGAGAG TCCGGCCTGT TCTCATGGAA GGAAGATGCG ACTCGCGATT CTGAGTCCGC GAAGAGCGCA CCGTCTGCTC TCTACGCCAA GTTTCGCAAC CGCATCATGT TTCCCATCCG CAACGAACAG GGAAAAGTGA TTGCGTTCAC CGGACGCACG CTTGCGACGG ACGAAAAGTC CGGACCGAAA TATCTGAACT CGCCGGAGAC GGCGATTTAT TCGAAGTCGC GGGTGTTGTT CAATCTCAAT CTCGCGAAGG AAGCCATCCG CGGATCGAAA GACGCGCCCG GCCTGGGCTA CGCCATTCTC GTCGAGGGTC AGATGGATTG CATCTCGCTC TATCGCGAGG ACGTCCACAA CGTGATTGCC ACCTCCGGCA CGGCGTTCAC GGAATTCCAG GCGAAACTGC TCGGTCGCTT TACCAAACAA GTCGTTGTCA ACTTCGATCC CGATACCGCT GGCGCCGCGG CCGCCGAGCG GTCCCTCGCG CTCCTCGTCA GCGAGGATTT CCAAATTCGC GTACTCACTC TGGAGCCGGG TTTCGATCCC GATTTGTATA TTCGCAAAAA AGGCCGTGAG GCCTATGCGT ACGCACTGAA GCATTCGCAG AAATATTTCG ATTACCTGAT CGATCGTGCG CGCAAGCAGT ATCCAACCGG AACTCCGGAA GGGAAGCTGA AGGCGGTGAA CTATCTCCTA CCGCACATCC AGCGGCTATC GAGCAAGCTC GTGCGCGACG AAATCGCGAT GGACATTGCG CACAAATTGC AAATTGATTC GACGGTGCTG AAAGAAGAAC TGCGCCACGT CGCCGGCAGT CGCACCGCGA CTTCTGTGAA AGCCTCCGCG GCTCCGCAGA TCACCCCGAT CGAGAAGATG CTGATCCGGG CGTTGGCATC CTCGAACCAA CTCGCAAAGG ATCCCGTTTC CTCCCGTGAA GGCCAGGACC TCGACTTCGA GGCGGCGCGG CAGGTGCACT ACGTCCTCGC GAACGAAACT CTTCACGCCG GTCTTCAAAC GGAGCGGCTC ATTGCAGCAC TCCTGAAGGC GGTAGAAGAC GGGAGCGATC CCATGACGCT GCCTCTCGGC GAAGGCGATC GCCGCACCCT CGCGACGATC CTCATGGGCG ACACCGAGAC GCTCACTCCT GAGGCAATGG AGGGTGCATT TGCGTCCCTG AGATTGCGCC GAATGAAAGC ACGCCGCTCC GATTTGGTTG TCGAAATCAC TGCCGCGGAG CGCAAAGGAG ACTCCGCCGC GCTCGGCCGC CTTTCCTTGG AAAAAATGCA ATTGGATCGG GAGATCAGGG AGTTGGACGA GGAATCGGGG TAG
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Protein sequence | MAVHLCVTPR LKRTLKSVAN PGDFAYDLKQ QADIVRVIGE YVQLRKAGAQ NYAGLCPFHN EKSPSFSVHQ SRQFFHCFGC GASGDVFTFI QKIENITFPE AVRSIAQKLG VPMPKVEYAS PQEAREAKMR GALLDANELA CAWFQEQLRK PDAAHAREYL KSRGLDAETV EKFRIGFAPE SGFLLRDRMK GEFNEEILRE SGLFSWKEDA TRDSESAKSA PSALYAKFRN RIMFPIRNEQ GKVIAFTGRT LATDEKSGPK YLNSPETAIY SKSRVLFNLN LAKEAIRGSK DAPGLGYAIL VEGQMDCISL YREDVHNVIA TSGTAFTEFQ AKLLGRFTKQ VVVNFDPDTA GAAAAERSLA LLVSEDFQIR VLTLEPGFDP DLYIRKKGRE AYAYALKHSQ KYFDYLIDRA RKQYPTGTPE GKLKAVNYLL PHIQRLSSKL VRDEIAMDIA HKLQIDSTVL KEELRHVAGS RTATSVKASA APQITPIEKM LIRALASSNQ LAKDPVSSRE GQDLDFEAAR QVHYVLANET LHAGLQTERL IAALLKAVED GSDPMTLPLG EGDRRTLATI LMGDTETLTP EAMEGAFASL RLRRMKARRS DLVVEITAAE RKGDSAALGR LSLEKMQLDR EIRELDEESG
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