| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4290 |
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| Symbol | |
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| ID | 4071863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5098673 |
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| End bp | 5099329 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637986323 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_593364 |
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| Protein GI | 94971316 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGTT TGCTGGTTGA CGATCACACG CTGTTCCGGC AGGGCGTACG CCGTTTGCTG
GAAGGCGAAA GCGACTTTGA AGTGGTTGGC GAATCGCCGG ACGCCGGCGA CGCGGTGGAA
AAAGCCCGCG AACTCCGCCC CGACGTGGTC CTGATGGACA TCGGCATGCC CGGACTTTCT
TCGTTCGAAG CGGCGCGACA TATCAAGAAG AACCGTCCGG AGACAAAAAT CCTCTTTCTC
ACCATGTATG AGGACGAAGA CTACCTGGTG CAGTGCCTGG AAGTTGGCGC TGCCGGATAT
GTGCTGAAGG ACACGCCAGC TCCACAACTC GTGACCGCAG TTCGCGACGT GTACAAAGGC
GGCAAGTACC TTAGCTCGCA AGTGCTTGGC AAGCTGGTGG AAGACTTCCG CGCGCGAGTG
CGCGATGCCA AGCTGCGGCC TCGCATCTCT ACTCTTACCC CGCGCGAGCG CGAGATTCTC
AAGCTGCTTG CAGAAGGCAA CTCAGTGAAG GAGATCGCGG TACTGTTGGG CCTCAGTGTG
AAGACCGTGG AAGCGCACAA GTTCAACCTG ATGCGCAAAC TCGATATTCA CAACAAGGCG
CAACTGGTGA CCTACGCGAT CCAAAAGAAG ATCATCAAGA TTCCAGTCAA CCAGTAG
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| Protein sequence | MRCLLVDDHT LFRQGVRRLL EGESDFEVVG ESPDAGDAVE KARELRPDVV LMDIGMPGLS
SFEAARHIKK NRPETKILFL TMYEDEDYLV QCLEVGAAGY VLKDTPAPQL VTAVRDVYKG
GKYLSSQVLG KLVEDFRARV RDAKLRPRIS TLTPREREIL KLLAEGNSVK EIAVLLGLSV
KTVEAHKFNL MRKLDIHNKA QLVTYAIQKK IIKIPVNQ
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