Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4279 |
Symbol | |
ID | 4071852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5085301 |
End bp | 5085999 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986312 |
Product | response regulator receiver protein |
Protein accession | YP_593353 |
Protein GI | 94971305 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.254527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTGA AGATTCTCAT CGTCGACGAT GACATCAACA CCCTGGAACT TCTGCGCGAA GTTCTCCAGT CCATGAGCTC CGAAGTGCGC TGCATTAACT CTTCAAAGCG CGCGCTCGAA ATCATCCACT CCGAAAAATT CGATGGCATC GTGCTCGACA TCATCATGCC GGAAATCAGC GGTCTCGAAA TCGCCGCTGA AATTCGAAAG AGCGCGCTCA ATCGGCGCAC CACGGTAGTT GCCATCAGCG GCAGTGACGA CCAAAAAACC ATGGAGGCGG CCATGGCCGC CGGCGCGACG TTTTTCCTGC ACAAGCCGTT CGACCGCACC AGCCTGATGA AGCGCCTGAA CAGCACCCGC GGCTCCATGC TCCAGGAGCA GCGCCGCTTC GTACGCATCC CGCTCACGAC CGCCGTGACC GGTTCGGCCG GGGCGATCGC GGTCCGCGGA ACCTGTCGCG ATATCAGCGA GGGCGGCCTG TGCTTTGTGG CCACCGCTCC GCTGACCCCC GGAATGAGCG TCTCCCTCGC GATCACGCTC GACAACAGCC AGCGTCTCGA CGTTACGGCA AAAGTCCTGC GCGTCTCCGA AGACTGCACC GTCGGCGTCC AGTTCGACTC TCTCAGCGCG CCCAATTTGG AACTCGTCCG TACGTTCGTC CGCCGCCGCC TCGAACGCTC AGGGGATTTT GGGATTTAG
|
Protein sequence | MALKILIVDD DINTLELLRE VLQSMSSEVR CINSSKRALE IIHSEKFDGI VLDIIMPEIS GLEIAAEIRK SALNRRTTVV AISGSDDQKT MEAAMAAGAT FFLHKPFDRT SLMKRLNSTR GSMLQEQRRF VRIPLTTAVT GSAGAIAVRG TCRDISEGGL CFVATAPLTP GMSVSLAITL DNSQRLDVTA KVLRVSEDCT VGVQFDSLSA PNLELVRTFV RRRLERSGDF GI
|
| |