Gene Acid345_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4279 
Symbol 
ID4071852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5085301 
End bp5085999 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content61% 
IMG OID637986312 
Productresponse regulator receiver protein 
Protein accessionYP_593353 
Protein GI94971305 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.254527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA AGATTCTCAT CGTCGACGAT GACATCAACA CCCTGGAACT TCTGCGCGAA 
GTTCTCCAGT CCATGAGCTC CGAAGTGCGC TGCATTAACT CTTCAAAGCG CGCGCTCGAA
ATCATCCACT CCGAAAAATT CGATGGCATC GTGCTCGACA TCATCATGCC GGAAATCAGC
GGTCTCGAAA TCGCCGCTGA AATTCGAAAG AGCGCGCTCA ATCGGCGCAC CACGGTAGTT
GCCATCAGCG GCAGTGACGA CCAAAAAACC ATGGAGGCGG CCATGGCCGC CGGCGCGACG
TTTTTCCTGC ACAAGCCGTT CGACCGCACC AGCCTGATGA AGCGCCTGAA CAGCACCCGC
GGCTCCATGC TCCAGGAGCA GCGCCGCTTC GTACGCATCC CGCTCACGAC CGCCGTGACC
GGTTCGGCCG GGGCGATCGC GGTCCGCGGA ACCTGTCGCG ATATCAGCGA GGGCGGCCTG
TGCTTTGTGG CCACCGCTCC GCTGACCCCC GGAATGAGCG TCTCCCTCGC GATCACGCTC
GACAACAGCC AGCGTCTCGA CGTTACGGCA AAAGTCCTGC GCGTCTCCGA AGACTGCACC
GTCGGCGTCC AGTTCGACTC TCTCAGCGCG CCCAATTTGG AACTCGTCCG TACGTTCGTC
CGCCGCCGCC TCGAACGCTC AGGGGATTTT GGGATTTAG
 
Protein sequence
MALKILIVDD DINTLELLRE VLQSMSSEVR CINSSKRALE IIHSEKFDGI VLDIIMPEIS 
GLEIAAEIRK SALNRRTTVV AISGSDDQKT MEAAMAAGAT FFLHKPFDRT SLMKRLNSTR
GSMLQEQRRF VRIPLTTAVT GSAGAIAVRG TCRDISEGGL CFVATAPLTP GMSVSLAITL
DNSQRLDVTA KVLRVSEDCT VGVQFDSLSA PNLELVRTFV RRRLERSGDF GI