Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4154 |
Symbol | |
ID | 4072113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4915939 |
End bp | 4919559 |
Gene Length | 3621 bp |
Protein Length | 1206 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986185 |
Product | TonB-dependent receptor |
Protein accession | YP_593228 |
Protein GI | 94971180 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.592663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTC TAAGAGCGTC GAGGTCGCCT CTTGGCCGAC GCCGTGGCCC CTGGGCCAAG GCATCTAGCC TAATTCTTCT CATCACCGTT CTAACTTTCC TTTCCACCCT CTCCTTCGCC CAAGTCACTT CCGGCACCAT GTTCGGAGAT GTCACAGACC CCAGCGGCGC GGTGATTCCC GGCGCAAAGG TGACCGCGCA CGCCGACTCG ATCGGCGTCA CCCGTACGGT TACGGCTTCC GGCACCGGCG AGTTCGTCAT TCCGAACCTT CCGCCTGCCA CATACACCGT CACTGTGGAG TCCAAGGGTT TCAAGGCCCT TAAGAAGGAA GGCGTCATCC TCAATGCGGC TGACAAGTTA AACGCCGGCC AGTTCGCCCT TCCTGTCGGC ACCACCGATA GTCAAGTTAC TGTTACCGCC GACGCCGCAC AGCTCCAGCT GCAGAGCAAC TCCGGCGAGC GCTCCGATAT CATCACCAGC AAGCAGCTCA ATGAAGTCGC ACTCAACGGG CGCAACGTCC TCGACTACAT GAAGCTCGTC CCCGGCGTTT CCGGCATGTA TGACGGTCAC GCCTCCGGCA CCGGCGGTAA CGACGCCTTC AACATCAACG GCACCCGCGC CAATCAGCAC GAGTACACGA TTGACGGCGC TTCTAACGTG GATACCGGCA ACAACGGTGG CACCCACATC ACTATCAATC CCGACGCCAT CGAGGAAGTG AAAGTCCTTA CCTCGAACTA CCAGGCCGAA TACGGCAAAG CCGCCGGCGG ACAAATTGCC CTTACCACCA AGTCCGGGAC CAACGATTGG CATGGCAATG GCCGCTTCTA CCATCGTCAC GAAGGCCTGA ACGCCAACGA ATATTTCAAC AAGCAAGCCG AACTCGCCGC AGGAAGCGAT AACGAACCAG CCAAGTATCG CTACAACTAC GTGGGCTACT CCATCGGCGG CCCGGTCCTC AAGAACAAAC TGTTCTTCTT CTGGAACCAG GAGTACTACC GCCAGTACGT TCCCCTTGGC AACACCATCC AGGCTTACGT CCCAACTGCC CTCGAACGGC AGGGCGACTT CTCACAATCG GTTCGACCCG GAACGGATGC CAGCGGCAAC GCCATCTCCG TTCCCGTGGA GATCTCGGGG CCCGGCATCG TCGGCAACAA GATCAATCGC GATGCCCTTA CGCCCGCCCA GCAGTCCACC TTCGACAACA TGCAGAAGAT CCTGAACCTG TACCCGATGC CCAACGTCCC TGGCTTTGCC GTAAATGGGC AGCAGTACAA CTATTCGACC CTGCCCTCCG CGCCCGATCC GCGCCGCGAA GACATCCTTC GTATCGATTG GCAGATCAAC AATGCGAACC GCATTTATGG TCGCTGGGCA CACAATGCCG ACACCATGAC CGCGCCTTAT ACGCCGTTCC CCGGCCCGTT CGGTATCTTC GCCTGCTCGG CTCCAGAGTT TAACGGCGGA TGCACCCAGA AGCACCCCGG CTGGAACTTC TCCGTCAACC TCGTTAGCAC CATCACCCCG ACCGTGTTGA ACGAGTTCTC CATCGGTCCC AGCCACACTC TCTCGCTGGC GGAATCCAAC GGCGGTATTT CTTCCTCGGC GCTTGGCGTC AACCTTCCGG TTCTCTATCC GGGACTCACC GACACCATTC CTGACGTCGC CTTCAACGGT ATGAACAACG TGGCGTTCTC CAATCCTTAT CTCGGCGCCA CCCCGTGGAA ACAGGCGAAT ACGACGATCA ACGTCAACGA CAACCTGACT TGGTCCTACA AGAACCATAC GTTTAAGACC GGCGTCTTCT ACCAGCGGAA CCGCAAAGAC CAGATTGCCT GGGGAAACAT CAACGGACAA TTCGGCTTCG ATTCCGGCCA GACCGCACCT TCGGGTTGCG ACAGTAATTC ACTTCAATGC GGCGACCCGA TCGCCAGCGC ATTGCTCGGT CAATTCCAGA GCTTTAGCCA ATCCACCGCC CGTCCCGTCG GCAAGTTCCG CTACGACCAA TGGGAACTTT ACGTTCAGGA CACCTGGAAA CTCACACCAA CCTTCACCCT CGACTACGGC ATGCGTTTCG CTTACATCCC GCCGCAGTAC GACGCCAATA TGCAGATCGC CCTGTTTGAT CCCAACGCCT ACAATCCCGC CAACGCTGTC GAGTTGGACG GCGGCGGCAA CATCATGCCC GGTACGGGCG ATGTGTACAA CGGCATGCGG TTCACCAAAA TGGGCGACCT CCCGGCTGGC GGTTGGGGAT CGCGCGGCTT CATGCCTGAA CCGCGCATCG GTTTCGCGTG GGATCCGTTC TCTAACCACA AGACGGTCCT TCGCGGCGGC TTCGGCATGA TGCACGACCG CGTTCAAGGC AACCTCATCT TCAACCCAGT CTTTAATAAT CCGGTCACTG TCAGAACCGC ATCCTTGGGT TCCGGAAGCA TTGAGCAGTT CGGCGGAGCG CCCGGCTTTG GCAATGGAGT TCTCGGTGGC GTGATCGGCG CCGATCTCTC CGGCAAGGTA CCCACCGTCT ACAGCTTTAG CCTCGGCGTC CAGCGCGAGA TTGGGTGGGG CTCCACCATT GACGTCGCCT ATGTCGGTTC TCTGTCTCGT CACCTCGTTA CCTCGCACGA CATCAATGCA GTGCCCTACG GCGCAGCGTT CGAACGCCAG AACCAGGACC CCAACTGCGA TCTGAGTTAT GAAGGCGGGC CGAACTTTGG CGGTACCGTG CCGAATGTGG AACCCAACCT CAATCCGATT TATACCGCAG CCGGTCTGAG TTTTAGCGGT CTCTGCGCCT ATGGTCATCC CGGCTATACC GACGCGTTCC TGGTTCCCTA CCGAGGCTAT GGCCAGATCG CCTACCTCGA TTGGGGTGGA ACGTCTAACT ACAACTCGCT CCAAGTCTCA TTCCAGAAAC GCTACGGCAA AGGACTCACC TTCGGCGCCG TCTATACCTA CTCAAAGAGC CTTGGCACTG CTAACTCCGA CCAGGATACG CAAGACGCCT TTAATGCCTT GGTCGATTAC CGTGCTTTGA GCTGGGACCG TACCCATGTG TTCGCCGCGA ACTATGTGTA CGACATCCCG GGCCTTGCCA AGCATTTCAA CGCACCCAAA TGGGTCGGCT ATATCACCGA CAACTACCAG TTGAGCGGAG TTACCAACTT CCAGACCGGT ACCCCTGTTG ATATGGGAAA CAACTGGTCT TGGGAGCACG GTGCTCTGAC TGGCGGCAAC ATGTGGGGTG CAACCCAGTA CTACTACACC CTCGACAGCT CCGGGAATCC GGTGCTGCCC GGCATCGGTC CGCCACCGCG TGGCTCACGC GACCAGATCC GCTACGGCGG CTTGCAGAAC TGGGATATGT CGCTCTTCAA GAACATCCCG TTCCATGAGC GCTACAACAT TCAACTTCGT CTCGAAGCCT TCAACGTGTT CAACCACACG AACTTCAGCG CCGCGCACTG GACGATCAAC ACCAATGGTC CGTGGGAGTA TTCACCCAAC GACGCGTTGT CCATAACCCA GGGTTCTGAT TGGGGAACAC CCCAGAGCAC ATATGGCACT GGCCCCAGCG GCTTCCGTGT AGTCCAACTC GGCGCCCGCT TTAGCTTCTA A
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Protein sequence | MLRLRASRSP LGRRRGPWAK ASSLILLITV LTFLSTLSFA QVTSGTMFGD VTDPSGAVIP GAKVTAHADS IGVTRTVTAS GTGEFVIPNL PPATYTVTVE SKGFKALKKE GVILNAADKL NAGQFALPVG TTDSQVTVTA DAAQLQLQSN SGERSDIITS KQLNEVALNG RNVLDYMKLV PGVSGMYDGH ASGTGGNDAF NINGTRANQH EYTIDGASNV DTGNNGGTHI TINPDAIEEV KVLTSNYQAE YGKAAGGQIA LTTKSGTNDW HGNGRFYHRH EGLNANEYFN KQAELAAGSD NEPAKYRYNY VGYSIGGPVL KNKLFFFWNQ EYYRQYVPLG NTIQAYVPTA LERQGDFSQS VRPGTDASGN AISVPVEISG PGIVGNKINR DALTPAQQST FDNMQKILNL YPMPNVPGFA VNGQQYNYST LPSAPDPRRE DILRIDWQIN NANRIYGRWA HNADTMTAPY TPFPGPFGIF ACSAPEFNGG CTQKHPGWNF SVNLVSTITP TVLNEFSIGP SHTLSLAESN GGISSSALGV NLPVLYPGLT DTIPDVAFNG MNNVAFSNPY LGATPWKQAN TTINVNDNLT WSYKNHTFKT GVFYQRNRKD QIAWGNINGQ FGFDSGQTAP SGCDSNSLQC GDPIASALLG QFQSFSQSTA RPVGKFRYDQ WELYVQDTWK LTPTFTLDYG MRFAYIPPQY DANMQIALFD PNAYNPANAV ELDGGGNIMP GTGDVYNGMR FTKMGDLPAG GWGSRGFMPE PRIGFAWDPF SNHKTVLRGG FGMMHDRVQG NLIFNPVFNN PVTVRTASLG SGSIEQFGGA PGFGNGVLGG VIGADLSGKV PTVYSFSLGV QREIGWGSTI DVAYVGSLSR HLVTSHDINA VPYGAAFERQ NQDPNCDLSY EGGPNFGGTV PNVEPNLNPI YTAAGLSFSG LCAYGHPGYT DAFLVPYRGY GQIAYLDWGG TSNYNSLQVS FQKRYGKGLT FGAVYTYSKS LGTANSDQDT QDAFNALVDY RALSWDRTHV FAANYVYDIP GLAKHFNAPK WVGYITDNYQ LSGVTNFQTG TPVDMGNNWS WEHGALTGGN MWGATQYYYT LDSSGNPVLP GIGPPPRGSR DQIRYGGLQN WDMSLFKNIP FHERYNIQLR LEAFNVFNHT NFSAAHWTIN TNGPWEYSPN DALSITQGSD WGTPQSTYGT GPSGFRVVQL GARFSF
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