Gene Acid345_4119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4119 
Symbol 
ID4072310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4878905 
End bp4879759 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID637986150 
Producthypothetical protein 
Protein accessionYP_593193 
Protein GI94971145 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.376643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.85938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAA AGTTTTGGGG CGTCCGCGGC TCAACCCCTA CGCCACAACT CGAGAACATG 
CGCTACGGCG GCAACACCTC GTGTGTTGAG GTGCGGGTCA ATGGGCAGAT CTTCGTCTTC
GACTGCGGTA CTGGGTTCCG CAATCTCGGC AAGCAATTGA TTAAGGAGTA CGCCGAAAAG
CCGATCCAGG CGCACGTGTT CATCTCGCAC TTCCACTGGG ACCACATCCA GGGCATTCCG
TTCTTCACGC CGCTCTACGA AAAAGAGGAC AACTACTTCT TCTTCCACTC GTCGAACCGC
TCGCGCGGGT TGCAGCGGGC GATCGAAGAG CAGATGGCCG ATCCGTACTT CCCGGTGGAC
ATGAGCGAGA TGGCGGCGCA CCGGAATTTC TACGACATCG AAGAAGACCG CATTGCGTTC
GATGATGCCA TCGTCCAGTC GAAGTGGCTG AACCATCCGC AAGGATGTTT GGGCTTCCGC
ATGGAAACCG AGGACGGCAT CCTCGTCTAT GCGACGGACA ATGAGCCGGG GCATCCGGTG
TTTGACAAGA ACGTGCGCAA GCTCGCCGAG GGCGCGGACA TCCTGATCTA TGACGCGCAG
TATCTTCCGG ACGAATACGC CGCGAAGAAA GTCGGGTGGG GCCACAGCCA TTGGCGCGAA
GCCGTCAATA TCGTGATGGA AAGCGGCGCC AAAGAACTCG TTCTCTTCCA CCATGATCCC
GATCACAACG ACGCCTGCGT GGATTCGATC GTGAAGTCGG CGCGCGATTA TTACCCGAGC
GTGCGTGCCG CGAGCGAAGG GATGGAGATC AGCGTTGGGG TGCACGAGCA GAAGGCTACG
AATTCGGCAG GGTAA
 
Protein sequence
MQIKFWGVRG STPTPQLENM RYGGNTSCVE VRVNGQIFVF DCGTGFRNLG KQLIKEYAEK 
PIQAHVFISH FHWDHIQGIP FFTPLYEKED NYFFFHSSNR SRGLQRAIEE QMADPYFPVD
MSEMAAHRNF YDIEEDRIAF DDAIVQSKWL NHPQGCLGFR METEDGILVY ATDNEPGHPV
FDKNVRKLAE GADILIYDAQ YLPDEYAAKK VGWGHSHWRE AVNIVMESGA KELVLFHHDP
DHNDACVDSI VKSARDYYPS VRAASEGMEI SVGVHEQKAT NSAG