Gene Acid345_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4084 
Symbol 
ID4072506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4838383 
End bp4839210 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content60% 
IMG OID637986115 
Producthypothetical protein 
Protein accessionYP_593158 
Protein GI94971110 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CGACCGAAGT CAGAGACCAG CACCAGCACC GCAGGTTGTC CGCGCAAGAA 
TGGGAACAAC AATGGCAGCG CACTTGGAAG GAATCGGGCA AGATGGCGTA CGAAATCAAC
GCCACCGACG AGCATAGCGC CGTCTCGGAA GAGCGCGCGT TACTGATGGA AGTGCGCTCG
CCAGTCCGCG AGCGCGAGCG CCTCAAACGC ATTAGCGACG AATTCGTCCA GGGCTTTGAC
AAGCTCTACG GAGTTGGCCC CGCAGTCACC GTCTTCGGCT CCGCGCGGTT TCACGAGGGC
CACAAGTACT ACGACCTCGG CTGCGAAGTC GGACGCGAAC TCGCCAAGGC AGGCTTCGCT
GTCCTCACTG GCGGCGGCCC CGGCATGATG GAAGCCGCCA ATCGCGGCGC CAAGGAAGCA
GGAGGAGCAA GCCTCGGCCT CAACATCATT CTTCCGTTCG AGCAGGCGCC AAACCCCTAC
GTGGATCAGA CCATCGAATT CCACTATTTC TTCGTGCGTA AGGTTTGCCT CGTCAAGTAC
TCGTGCGCGT TCATCTGTTT ACCCGGAGGC TTCGGGACCC TCGACGAACT CTTTGAAGCC
GCGACCCTCA TCCAATGCGG CAAGATCGGC CCGTTCCCTC TCATCCTTAT CGGAGAGGAA
TTCTGGTCCG GTGTCCGCGA CTTCACCGCG CACCTTCTCG GAGAAGGCGC CATCGGCATG
GAAGACACTG GCTTTGCCCG CATCACCGAC TCGCCCAAAG AAGCCGTGGA GCTCGTCGTT
GCCAGTCTGC CCGTCGAACT CAAGGAACGG CTGAAGCCGA GGAGTTGA
 
Protein sequence
MSDSTEVRDQ HQHRRLSAQE WEQQWQRTWK ESGKMAYEIN ATDEHSAVSE ERALLMEVRS 
PVRERERLKR ISDEFVQGFD KLYGVGPAVT VFGSARFHEG HKYYDLGCEV GRELAKAGFA
VLTGGGPGMM EAANRGAKEA GGASLGLNII LPFEQAPNPY VDQTIEFHYF FVRKVCLVKY
SCAFICLPGG FGTLDELFEA ATLIQCGKIG PFPLILIGEE FWSGVRDFTA HLLGEGAIGM
EDTGFARITD SPKEAVELVV ASLPVELKER LKPRS