| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4059 |
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| Symbol | |
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| ID | 4072481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4800189 |
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| End bp | 4804169 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637986090 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_593133 |
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| Protein GI | 94971085 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.129878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTTC TCTCTAAGTT CAAAATTCGT CGCAAGCTGC TGATCGCGCT CTTGCCGCTG
GTCGTGATGG CAATCATCGC GGTGGCGTAT TCCAGTCTCC AGCTACGACA GGTTGACAGC
AGGTACAGCG AATTAGTGAC AAAGGATGTG CACACCCTGC AAAACCTGAT CGATGCCCGA
GCCTTGTGCA CGCGTTTTTG GTTGTTGCTG TATGAACAAA TTGCGGCTGA GAACTCGACC
GCAACGCTCG CTGAAGACGC AGAGTTCGAC AAACTCGCGA ACCAGGTCAG CACTTTAATC
TCGGAAGCCG GCGAGCAGAG TCCGAGGTTA ACCGAATCCG CAAGAAATAC GACATTTCTA
TTCAATCAGG CCATAAACGA ATCGCGCCCA GTGCGGGATT CGAACATCGC CGGTGACCAC
GTAAAAGCGC TGGCATTGAT GCGGGACAAG ACTGGGCCAC GGCTCCTGGT GGCACGCGAT
GCTTTGGAAT CACTGATCGC ATTGCAGTCG AAAGCGCTCG ACGAGGAGTC CGCCGCACTG
ACCGTGGAGA CAAACCACAC GATTCTGATC GTGTGGGCCT TCATGGGGCT GGGAATCGTG
GCGACTTTTG GTTTCTCGTT AGTCGTCATT CAACGCGAAG TCGTCGATGT CATATTGTCT
TTCCGTGACC GTGTACTCGA TGTCGCAGAG AACCGACTTG ACCAGAAGAT CGAGGGCCTC
GCGCTACCGA ATGAGATCGG CGAAATGAGT CGGGCGCTGC ATTCGCTTCA AACCGCCGCG
AAGGAGCGTG AGACACAGCG TTGGCTGAAA TCCGAAGTTG CGACCACGAT TGAAAGTCTG
CAAAAGTCCG AGAGCCACGA AGCCTTCGCT CGGACGCTGC TCTCGCGTAT TTCAGAGTCG
GTTGGCATCG TTTATGGCGC CGCGTATTTC CTGGACCGCG CTCGACAACG CTACGTCCGC
TCGGCAACCT TTGCTTTCGA CGGGTCCGGT GGCTCAAACG AATTTGCGGC AGGGGAAGGG
CTGGCCGGAC AGGCTGTGGC CGAAAAAAGA GCACTGCAAA TCCACCTCTC CGAACAGAAC
GAACTGAGTA TCCCCGCTGG GATCGGCGTC GTTCGCCCGG CGCAACTGTG GTTCGTACCC
ATAACCACGA GCGACGAAGT GATTGGAGTC GTGGAATTAG CCAGCGCGGG AACACTGACG
GCCGAACAGA TTGAGCTTCT TCATGCTCTC CTGCCCGCAA TCGCTTTGAA CCTCGAGATC
CTGAATGCCA ATCTTGCAAC GAGGAAACTG CTTGAACGGA CTCAACAGCA GGCCATAGAG
ATTGCCGAGA CGGAAGAGAA GTCGCGGCTA ATTCTGGGGT CCGTGGACGA AGGCATCGCG
GGAATGGACG CCAAGGGATA CATCACGTTC ATCAATCCGG CGGGTGCTGA CATGCTGGGC
TATGACCAAG CCGGAATCGT CGGCGCGCAC CTGCACTCGA CAATCCACTA CGCACACTCC
GATGGGTCGC CGTATTCGCG GGACGACTGT CCCATGTACA GAACGGCGAT CACGGGAGAA
GCGTGCGCCG TTGACGACGA AGTGCTGTGG CGTAAAGACG GTGGGGCGTT CCCCGCGGAA
TATGCAGCCA CTCCTGTTCT GAAGGACGGC CGGGCTGTCG GCACCGTTGT CGCATTCCGC
GACATCACTG AGCGCAAGAA GAACGAAGCC GAGTTGCGAC GCGCCCGTGA GGCGGCCGAG
GACGCGACGC GAACCAAAAG CGACTTCCTG GCGAACATGA GCCATGAGAT CCGCACGCCA
ATGAATGCGA TTATTGGCAT GTCGCACCTC GCGCTGAAAA CGAATCTTTC CCCGCAACAA
CGCGATTATT TGAACAAGAT TCAGATCTCC AGCCATCACT TGCTCGGCGT GATCAATGAC
ATCCTCGATT TCTCGAAGAT CGAGGCAGGC AAGTTGAACG TGGAAAGCAT CGACTTCAGC
CTGGAGAAGG TGCTGGAGAC ATTGGCAAAT CTCATCGGGG AGAAGGCCTC AGCGAAGGGC
CTCGAACTGA TCTTTGATAT TTCGCCGGAT GTGCCTCACA ACTTAATTGG CGACCCACTT
CGTCTTGGGC AAATCCTCAC CAACTACGCC AGCAATGCGG TGAAATTCAC TGAGCACGGT
GAGATCGTAA TTGGCGCCAA GGTGCAGGAG AGAACTGACG ACGAGGTGCT GCTCTATTTC
GCGGTGCGTG ATACAGGCTT GGGGCTGACC GCTGAGCAGA AGGCTCGACT ATTTCAGTCA
TTCCAGCAAG CCGATACCTC CACCACTCGC AAACACGGTG GAACTGGCCT GGGACTGGCG
ATCTCGAAAC AGCTCTCTGC CTTAATGCAC GGCGAAGTGG GCGTAGAGAG TGAGCCTGGC
AAGGGCAGCA CGTTCTGGTT CACTGCAAGG ATGGGCATCG GGCAGAGCAA AGCCGACAAG
TACCTTCCCG TCTCAGACCT GCGGGGCCGT CGCGTGCTCG TTGTGGACGA CAACGAGTCC
GCACGCAAGG TGCTGGACGA GATGCTGTCG AGCATGACTT TCCAGGTCAC CACCGCGAAC
GGCGGGCACG AAGCAATTGA CCAGGTACGG CAGGCAGCGC AAGCAGAGTC GCCCTACGAC
ATTGCATTCC TCGATTGGCG TATGCCGGGC ATGGATGGAA TCGAGACAGC GAAGGCAATT
CGCGGACTTG GACTCGAACG TTCACCGAGG ATGGTGATGG TGACTGCATA CGGCCGCGAA
GAGGTGATGC GCGGCGCAGC GGAGGCTGGC ATCGAGGATG TCCTGATTAA GCCCGTCGGG
GCTTCCCTTC TCTTCGACAC AATCATGGCG GTGTTGGGTG GCTCGAGGCA GGAGGACCGG
CAATCCGAAG GTTCGGACAA CGCTATCGCT GCGCACTTGG CCGACTTGAA AGGCGCGGTC
GTGTTGTTGG CCGAGGACAA CGAATTTAAC CAACAAGTGG CCACCGGATT ACTCAACGAG
GTTGGGGTCA ACGTCGAGAT TGCGGGTGAT GGCAAACAAG CTCTCGCCCG GCTCGCCGAG
CGAACCTACG ACGCCGTTCT GATGGACATG CAGATGCCGG AAATGGATGG ACTCGCGGCT
ACCCGCGAAA TCCGTAAGCA AGCGCGTTTC AAAGATCTGC CAATCATCGC CATGACGGCG
AACGCAATGG AGCAGGACAA GGAACGCTGC ATTGCCGCCG GCATGAACGA TCACATCGCG
AAGCCGATTG ATCCTGATCA CCTGTTCAAC ACTCTCCTGA AATGGATCAA GCCAAGGTCT
CAGGCGGCGC CGGAAGCCAA GGCGACTGCC GTAAAACCTC CCGCAGTTGC GGTCGCTCTT
CCAACCATCG AGGGGCTTGA TACCGCGCAA GGTCTCCAGA GGGTAATGGG AAATAAAACT
CTCTATACCG GACTGTTGCA GAGGTACATC ACCAATCAGA AGAGCGTCTG CGCTGAACTT
CGTGCGGCGC TGGCTGCTGG AGATCGCCAA ACCGCAGAGC GCATTGCGCA CACCGCGAAA
TCGGTCAATG GGAACATCGG CGCAGGACAG TTGCAGGAGC TGGCGGCCGA AATGGAGAAC
ATGATCCGTT CAGGTGCCGA TGTCCCGACC GTAGGAGAAA GAGTCAGCGT CTTCGCCGAA
ATTCAGCAGA AGCTTATCTC GGCTCTTTCG GCGGCATTCC CGGCAGAAGA AAGCGTCGTT
CAGAGTGCGC CTGTGGATGC CGCTAAGCTC GCGGCTGTTT CGCAAGAACT TCTGAGATTG
CTGAAGGACG ATGACTCCGC TTCCACCGAT CTTTTGCAGG AACATCGCGA TCTCCTGCGG
TCCGCTTATC CGGAACACTT CCGCACAATT GAGAACAGTA TTCGGGCCTT CAATTTCGAG
GCAGGACTCG CAGCGTTGAC GAAAGCTATG GAATCGCTGC CACAAGGTGA GACACATGGA
CAATCCGCAG GAACAACATA A
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| Protein sequence | MGLLSKFKIR RKLLIALLPL VVMAIIAVAY SSLQLRQVDS RYSELVTKDV HTLQNLIDAR
ALCTRFWLLL YEQIAAENST ATLAEDAEFD KLANQVSTLI SEAGEQSPRL TESARNTTFL
FNQAINESRP VRDSNIAGDH VKALALMRDK TGPRLLVARD ALESLIALQS KALDEESAAL
TVETNHTILI VWAFMGLGIV ATFGFSLVVI QREVVDVILS FRDRVLDVAE NRLDQKIEGL
ALPNEIGEMS RALHSLQTAA KERETQRWLK SEVATTIESL QKSESHEAFA RTLLSRISES
VGIVYGAAYF LDRARQRYVR SATFAFDGSG GSNEFAAGEG LAGQAVAEKR ALQIHLSEQN
ELSIPAGIGV VRPAQLWFVP ITTSDEVIGV VELASAGTLT AEQIELLHAL LPAIALNLEI
LNANLATRKL LERTQQQAIE IAETEEKSRL ILGSVDEGIA GMDAKGYITF INPAGADMLG
YDQAGIVGAH LHSTIHYAHS DGSPYSRDDC PMYRTAITGE ACAVDDEVLW RKDGGAFPAE
YAATPVLKDG RAVGTVVAFR DITERKKNEA ELRRAREAAE DATRTKSDFL ANMSHEIRTP
MNAIIGMSHL ALKTNLSPQQ RDYLNKIQIS SHHLLGVIND ILDFSKIEAG KLNVESIDFS
LEKVLETLAN LIGEKASAKG LELIFDISPD VPHNLIGDPL RLGQILTNYA SNAVKFTEHG
EIVIGAKVQE RTDDEVLLYF AVRDTGLGLT AEQKARLFQS FQQADTSTTR KHGGTGLGLA
ISKQLSALMH GEVGVESEPG KGSTFWFTAR MGIGQSKADK YLPVSDLRGR RVLVVDDNES
ARKVLDEMLS SMTFQVTTAN GGHEAIDQVR QAAQAESPYD IAFLDWRMPG MDGIETAKAI
RGLGLERSPR MVMVTAYGRE EVMRGAAEAG IEDVLIKPVG ASLLFDTIMA VLGGSRQEDR
QSEGSDNAIA AHLADLKGAV VLLAEDNEFN QQVATGLLNE VGVNVEIAGD GKQALARLAE
RTYDAVLMDM QMPEMDGLAA TREIRKQARF KDLPIIAMTA NAMEQDKERC IAAGMNDHIA
KPIDPDHLFN TLLKWIKPRS QAAPEAKATA VKPPAVAVAL PTIEGLDTAQ GLQRVMGNKT
LYTGLLQRYI TNQKSVCAEL RAALAAGDRQ TAERIAHTAK SVNGNIGAGQ LQELAAEMEN
MIRSGADVPT VGERVSVFAE IQQKLISALS AAFPAEESVV QSAPVDAAKL AAVSQELLRL
LKDDDSASTD LLQEHRDLLR SAYPEHFRTI ENSIRAFNFE AGLAALTKAM ESLPQGETHG
QSAGTT
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