Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4023 |
Symbol | |
ID | 4071160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4756487 |
End bp | 4757614 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986051 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_593097 |
Protein GI | 94971049 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGC TAGCGCAACG AAACCTGCTG CACGATAAAG TTCGACTCAC CGTAACGCTC ACGGGCATCG TGTTTGCAGT GGTGCTGATC GTCGTGGAAC TGGGGCTCTT CGTCGGATTT ACGGTCACGA CATCGAGCAT CATCGATCGT TCGCGTGCCG ATCTCTGGGT CGTGTCGAAG AACACACCGT ACATCGAGCA GGGACGCGCA TATTCCGAGC GCAAGTTGTA CCAGGTGCTG GCGACGCCGG GTGTGGCGTC GGCAGAGAAG TACATAGCGC ACTGGACACA GTGGAGGACC CCGGATGGCG CCGAGGAATC GGTGCAGATC ATCGGATTCG ACACGCACGC ACCAAGTCTG GGCGGCCCGT GGAACCTCGT GGCCGGCAGC GTGGATGACC TGCGGACGCC CGATGCCATC ATTCTCGACG AGCTGTACAT GAAGAAGCTG GGCGTGACGC ACATCGGCCA GGTCTGCGAG ATCAGCGGGC GCCGTGCGCG AGTGGTTGGA TTCACGCGCG GAATTCGTTC GTTCACGACC AGCCCGTATG TCTTCACCGA TTTCAAGAAC GCGCAGGGCT ACACAAATTT GCCGGAGGAC CAGACCAACT TCATCCTGGT AAAGACGAAG CCCGGAGTGA GTGTCGAGCA GTTGCGGCAC GAACTCGAAA GCCGAGTGCG CGACGTAGAT GTGCTGCCGA CCGCGAAATT CAGCAGTATG ACGCGCATCT ACTGGATGTT TACCACGGGC GCGGGAGTTG CGGTGCTGAT CGCGGCAGTG CTCGGTCTGG TGGTGGGAGT CGTAGTGGTT GCGCAGACCA TATACGCGAC GACGATGGAC CACATCCGCG AATACGGCAC GCTCAAGGCG ATGGGCGCAG CGAACAGCTA CATCTATCGC GTGATCATCA CGCAGGCGGG CATTAGTGCG GTCGTCGGGT ACCTGCTCGC GATGGTGGTG AGCGTCTTCA TTGTTCGCGC GAGTGCGAGC GGCGGGGCAG CCATCATGTT GCCGTGGCAG ATGGCAGTCG GCATCTTCTT CCTGACCGTT TTGATGTGCG TGGTCGCGGC CATGGTATCG ATCAGTAAAG TTACCTCGAT TGATCCCGCG ATGGTTTTCA AAGGATAG
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Protein sequence | MPPLAQRNLL HDKVRLTVTL TGIVFAVVLI VVELGLFVGF TVTTSSIIDR SRADLWVVSK NTPYIEQGRA YSERKLYQVL ATPGVASAEK YIAHWTQWRT PDGAEESVQI IGFDTHAPSL GGPWNLVAGS VDDLRTPDAI ILDELYMKKL GVTHIGQVCE ISGRRARVVG FTRGIRSFTT SPYVFTDFKN AQGYTNLPED QTNFILVKTK PGVSVEQLRH ELESRVRDVD VLPTAKFSSM TRIYWMFTTG AGVAVLIAAV LGLVVGVVVV AQTIYATTMD HIREYGTLKA MGAANSYIYR VIITQAGISA VVGYLLAMVV SVFIVRASAS GGAAIMLPWQ MAVGIFFLTV LMCVVAAMVS ISKVTSIDPA MVFKG
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