| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4021 |
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| Symbol | |
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| ID | 4071158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4754579 |
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| End bp | 4755616 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986049 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_593095 |
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| Protein GI | 94971047 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GAATATTTAC GATCGGCGCT GCAATCCTCG TTACCGCGTC CACCGCTACC
GTCATTTGGG GCCACTCGGC GCGCCAAGCC CGCGAGAGCG TGGTTCAGAA GAACACCGCG
GATTGGATCG TTGCCGGCGC CGGCCGCGTC GAGCCCGAGT CAGAAGACAT TAAGCTCGGA
GCCGAGTTGA GCGGAAAGCT CAAATCGGTC TACGTGGAAG AAGGCGATCG CGTGAAGCAA
GGCCAACTCC TTGCTGAATT GGAGAACGCG GACTATCACG CGCAGGTTGC GTCCGCGCAG
GCCGAGGTGC ACGAGACGGA AGCGCAGCTT CGCAAAGTGG TGAACGGCGC TCGGCGCGAA
GAGCGGCGTG AGGCGCTCTC CACCGTCGAG CAGGCGCGCG CGGTGATGAA CAACTCCGAA
AGCGAAATGC TGCGTCGCCA GAAGCTCTAT GAAGCGGGAG TCATCTCGCG CGAAGAAGCC
GAGCAGTATG CGAAGGAATA CGACGTCGCC AAAGCGAAAT TCCAGGAAGT CTCCGAGCAC
CACAAGCTGG TAGACGAAAC CGCTCGCGAA GAAGATCGCG ACATCGCGAC GGCCAACTTG
CTTGCGGCGC GAGCACGGCT GGAGCAGGCG CAAGCGATGT TGGCGAAGAC GTTCGTTCGC
TCTCCCATCG AAGGCACGGT GCTGCGTAAA CATCATCGTC TCGGTGAAAG CGTTTCTAAC
GGTTCGACGG TCCCGGATCC CATCGTGACG ATTGGAGCAA CAGAACGGCT GCGCGTCCGC
GTTGATGTGG ACGAGGCCGA TGTCAGCAAG CTTACGGTCG GGCAGAAAGC GTATGTGACC
GCCGATGCGT ATGGCGATAA ACGCTTCCGG GGGCACATCG TGCGCATTGG CCAGGAGCTC
GGACGCAAGA ACGTTCGCAC CGATGAGCCC ACCGAGCGGG TAGACATGAA GATCCTCGAG
ACCATGATCG AACTCGATGG CGGAGACGAA TTGCCAATCG GACTGCGCGT GAATACGTTT
ATCGTTCCGA AGAGCTAG
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| Protein sequence | MKKRIFTIGA AILVTASTAT VIWGHSARQA RESVVQKNTA DWIVAGAGRV EPESEDIKLG
AELSGKLKSV YVEEGDRVKQ GQLLAELENA DYHAQVASAQ AEVHETEAQL RKVVNGARRE
ERREALSTVE QARAVMNNSE SEMLRRQKLY EAGVISREEA EQYAKEYDVA KAKFQEVSEH
HKLVDETARE EDRDIATANL LAARARLEQA QAMLAKTFVR SPIEGTVLRK HHRLGESVSN
GSTVPDPIVT IGATERLRVR VDVDEADVSK LTVGQKAYVT ADAYGDKRFR GHIVRIGQEL
GRKNVRTDEP TERVDMKILE TMIELDGGDE LPIGLRVNTF IVPKS
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