Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3976 |
Symbol | |
ID | 4072449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4701522 |
End bp | 4702745 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986003 |
Product | major facilitator transporter |
Protein accession | YP_593050 |
Protein GI | 94971002 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCC TTCGCAAGGT CTTCAAGGCA TTCTCCTATC GCGACTTCCG CCTCATGTGG TTTGGGGCGT GCACCTCCAG TATTGGCACG TGGATGCAGA TCGTCGCGCA GGGCTGGCTC ATTTACCGGC TGAGTCATTC CGCCTTCCTG CTTGCGTTGG ACCAGTTCAT GGGCGGCATT CCGATCTTCG TCCTCACCCT GATCGGCGGC GTGGTGGCCG ATCGCGTCGA ACGCCGCAAA GTTCTGCTGA TCTCGCAGTT CATCCAGATG GCGAGCGCCA TCACCCTCAC CGTCTTAGTC GCGACGAACT ACCTGAAAAC TGCACACGAT GTGTGGATGA TCATCACCTT GTCCTTCGTC TCCGGCGTGG CGCAGGCTTT CGGCGGACCG GCTTATTCCG CGCTGATCCC GACGCTGGTG GACCGCGAAG ACATGCCGAA CGCGATTGCG CTGAACTCCA TCCAGTTCAA CATGGCGGTG ACGGTTGGCC CAGCGCTGGC AGGCATCACG CTCGCCAAGC TCGGAGAGAA GTGGTGCTTC GGCCTGAATG CGGTGTCGTT CCTGGCGCCG GTGCTCTCTC TCCTGATCAT CTCGGCGCGG TTCCAGCCGC AGCGCACCAA AGAGAGCGTG CTCACCAGCC TGAAGCAGGG CATCAGTTTT GTTCGGCAGC GCGAAGCGAT GGTTGCGCTG ATTGTGCTCG CGTTCTGCAT GACCGCCCTC ACCGCGCCCA TGCGCACCTA CTTCCCAGTC TTCGTGAAAG ACATCTTCCA CCGCGGCGCC GAGACGTACG GTTGGCTGCT GTCAGCCATG GGCATTGGCT CGATCATTGG CTCGCTGATC ATCGCGAGCC GCGGCAACAT CCACAACAAA GGGCGCGTGG CGCTGGTCAC CATGACCTGC CTCGGCGCGG CGATTTCCGC CTTTGCGCTC TCTCGCGCTC TGCCGTTCAG TTATTTCTCG GTGATCATCG TGGGTGCTTC CATGATGGCC GTCTTCGCCA CCGTGACCTC GCTGGTGCAA TTGATTACGA CAAACGAAAT GCGCGGGCGC GTGATGAGCG TCTATAACTG CGCCTTCCGT GGCGGCATGC CGATGGGCAA CCTCGTCACC GGCCAACTGG TTCCGATCTA CACTGCGCCA ATCGTCGTCG GTGCGAGCGG GGGATTGCTG GTGCTGATTG CGATTTACTA CCTGCTGTTC CAGCGCCGGG TCGCCGCGCT CTAG
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Protein sequence | MLTLRKVFKA FSYRDFRLMW FGACTSSIGT WMQIVAQGWL IYRLSHSAFL LALDQFMGGI PIFVLTLIGG VVADRVERRK VLLISQFIQM ASAITLTVLV ATNYLKTAHD VWMIITLSFV SGVAQAFGGP AYSALIPTLV DREDMPNAIA LNSIQFNMAV TVGPALAGIT LAKLGEKWCF GLNAVSFLAP VLSLLIISAR FQPQRTKESV LTSLKQGISF VRQREAMVAL IVLAFCMTAL TAPMRTYFPV FVKDIFHRGA ETYGWLLSAM GIGSIIGSLI IASRGNIHNK GRVALVTMTC LGAAISAFAL SRALPFSYFS VIIVGASMMA VFATVTSLVQ LITTNEMRGR VMSVYNCAFR GGMPMGNLVT GQLVPIYTAP IVVGASGGLL VLIAIYYLLF QRRVAAL
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