Gene Acid345_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3972 
Symbol 
ID4072445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4698551 
End bp4699000 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID637985999 
ProductMerR family transcriptional regulator 
Protein accessionYP_593046 
Protein GI94970998 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA TTGCAGCGGA ACTGACGGTG GGCGAGGTCG CGAAACGAAG CGGAGTGGCG 
GTTTCAGCGG TCCACTTTTA CGAGACTGAG GGGCTGATCC GGAGCTGGCG GACGGCTGGG
AACCAGCGCC GGTTTGGCCG CGAGGTGCTG CGACGGATCG CAATCATCAA GGTCGCGCAG
AAGACCGGGA TCCCGCTGGC GCAGATTCGC GAAGCCCTGA GCACTCTGCC GCAGGGCCGG
GCGGCGACGA AGGAAGAATG GTCGAAGATG GCGGCGATGT GGCGTGGCGA ACTCGACGAC
CGGATTGAAC GGCTGACGCG GTTGCGGAAT CAACTCGATG GCTGCATCGG TTGCGGATGC
CTGTCGCTGG CGACTTGTCC GTTGCGTAAT CCTGGCGATC GAGTGGCAGA GCAGGGGCCG
GGGCCGCGGT TTCTTGATCC GGAGCCTTAG
 
Protein sequence
MPEIAAELTV GEVAKRSGVA VSAVHFYETE GLIRSWRTAG NQRRFGREVL RRIAIIKVAQ 
KTGIPLAQIR EALSTLPQGR AATKEEWSKM AAMWRGELDD RIERLTRLRN QLDGCIGCGC
LSLATCPLRN PGDRVAEQGP GPRFLDPEP