Gene Acid345_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3927 
Symbol 
ID4071310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4641582 
End bp4642106 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID637985953 
Productthioredoxin-like 
Protein accessionYP_593001 
Protein GI94970953 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.298512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCA AGATCATCCT CGTCGTTATT GTGTTCGCCG TGGCCGGTGT GATTTTCTGG 
CAGAACCGTG GTTCGAAGTC TGCCGCGCCG GGTCAACCTG CAGCCAGCAA GACCACTGGG
CCGCAGTTCA CGGTGACTGA TCTGAACGGG AAAACCATCG ATTCCGCGAG CCTGCGCGGC
AAAGTTGTTC TCGTAGATTT CTGGGCGACG TGGTGCGTGC CCTGTGAAGG TGAGATCCCG
CACCTGATCG AGTGGCAGGA CAAGCACGCG AACGACGGTT TCCAGGTGGT TGGCCTTTCG
ATGGACGACA CTGCCGGACC GGTGAAGACC TACGTCGAGA AGAAGAAAAT GCAGTACCCG
GTAGCGATGG CCGACGACAA AACCATCGCG GCGTTCGGCG GCGTGCTGGG TTTGCCGGTG
AACTTCATCA TTGGTCGTGA CGGACGGCTC ATCGCCCGCC ATGCGGGTGT AACCGACATC
AACGTACTGC AACAGGAAGT TGAGCGCGCG CTGGCGGAGA AGTAG
 
Protein sequence
MTRKIILVVI VFAVAGVIFW QNRGSKSAAP GQPAASKTTG PQFTVTDLNG KTIDSASLRG 
KVVLVDFWAT WCVPCEGEIP HLIEWQDKHA NDGFQVVGLS MDDTAGPVKT YVEKKKMQYP
VAMADDKTIA AFGGVLGLPV NFIIGRDGRL IARHAGVTDI NVLQQEVERA LAEK