| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3921 |
|---|
| Symbol | |
|---|
| ID | 4071304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4635810 |
|---|
| End bp | 4637414 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637985947 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_592995 |
|---|
| Protein GI | 94970947 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.710611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.101565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA AGTTTGATCC TATCGAGCTT GAGATTTTCA AAAGCATCTT CCACTCGATT
GCCGAGGAGA TGGGTGCGGC GCTACGACGC ACCGCGTTTT CTCCCAACAT CAAAGAACGT
CGCGATTATT CTTGCGCGGT CTTCGACGCT GCAGGCCACG CGCTCGCGAT GGGCGATCAC
ATGCCGGTGC ACCTGGGCTC GATGCCGATG AGCGTGGCAG CCGCGCTGCA AGACCTGGTG
CTCGAACCCG GCGATGTCGC GATGGTGAAC GATCCGTTCC GAGGCGGAAC CCATCTGCCG
GACATTACGT TTGTAGCGCC CGTATTCATT GGTAAGAACA AGAAGCCGGA TTTCTTTGTG
GCATCGCGCG CGCACCACGC GGATGTCGGC GGAACGTTCG CGGGATCGAT GGGTCTGTGC
AGCGAGATTT ACCAGGAAGG CTTCCGGATT CCGCCGGTGA AGCTGGTGCG TCGCGGGAAG
ATGGATCGCG ATCTGCTGGC CCTGTTGCTG GCGAACGTGC GTACGCCGCG CGAGCGCGAA
GGCGATTTGA GCGCGCAGAT TGCCGCGTGC CATACCGGCG AAACGCGGCT GCGTGAAGTC
TGTGCGCGCT ACGGGCTAGC GCGGGTGCAG CAGGCGGCTG ACGCACTGCT GGACTATTCC
GAGGCGATGA TGCAATCGCT CCTGGCGCAA ATTCCTGTGG GAAGCTACGA GGCAGAAGAT
TTCCTCGATG ACGACGGCGC TCCGGTTGCG GGAACGAGTG AGGTGCACGC CTCGAAGCCA
GTTCGAATCG CAGTGAAACT CACATTCGCG CGGGAGAAGA AGCGCAATGT GGTGACCGTA
GATTTCACGG GAACCGACCC GCAAGTGAGT GGGAGTACGA ACGCGGTGGA GGCGATCACT
TACTCGGCAT GTTTCTACGT ATTCCGCTGT TTGCTGGCGG AAGACGTGCC GGCAACCAGC
GGATTAATGC GGCCAGTGCG TTTGATCGCG CCGAAAGGGA CGGTGGTGAA TGCCCGGCCA
CCAGCGGCAG TCGCGGGCGG CAACGTGGAG ACGTCGCAAC GAATTGTGGA TGTGCTGCTG
CGCGCGCTGG CGAAGGTAAT GCCGGAGCGG ATTCCAGCGG CTTCCTCCGG AACCATGAAC
AACCTGACCA TCGGCGGAAT CGATCCCCGC ACCGGCGAGC CCTTCGCCTA TTACGAGACG
ATCGCCGGCG GGTCCGGAGC GAATACCGAC GGCGACGGCG CAAGCGGTCT GCATACGCAC
ATGACGAACT CGCTCAACAC GCCCGCAGAG GCGCTGGAGT ATGCCTATCC CTTCCGCGTA
ACGCGCTATG GGATTCGGCG CGGAAGCGGT GGAGCGGGGA AGCATTGTGG CGGCGATGGC
ATCGTGCGAG AAATCGAGGT GCTGACGGAT GCGCAGGTCA CGTTGCTCTC GGAGCGACGA
ACGATTCCGC CGTATGGAGC AAAAGGCGGA TCACCGGGAT CGCTGGGCAA AGCGGCGATC
GTGGGCTCGG AGGCGCGAAC AATCCCAGGC AAAGCGACTG GGAAACTAAA GAAGGGCGAA
CGGATTCGCG TGGAAACCCC GGGCGGTGGT GGCTGGGGCC GCTGA
|
|---|
| Protein sequence | MARKFDPIEL EIFKSIFHSI AEEMGAALRR TAFSPNIKER RDYSCAVFDA AGHALAMGDH
MPVHLGSMPM SVAAALQDLV LEPGDVAMVN DPFRGGTHLP DITFVAPVFI GKNKKPDFFV
ASRAHHADVG GTFAGSMGLC SEIYQEGFRI PPVKLVRRGK MDRDLLALLL ANVRTPRERE
GDLSAQIAAC HTGETRLREV CARYGLARVQ QAADALLDYS EAMMQSLLAQ IPVGSYEAED
FLDDDGAPVA GTSEVHASKP VRIAVKLTFA REKKRNVVTV DFTGTDPQVS GSTNAVEAIT
YSACFYVFRC LLAEDVPATS GLMRPVRLIA PKGTVVNARP PAAVAGGNVE TSQRIVDVLL
RALAKVMPER IPAASSGTMN NLTIGGIDPR TGEPFAYYET IAGGSGANTD GDGASGLHTH
MTNSLNTPAE ALEYAYPFRV TRYGIRRGSG GAGKHCGGDG IVREIEVLTD AQVTLLSERR
TIPPYGAKGG SPGSLGKAAI VGSEARTIPG KATGKLKKGE RIRVETPGGG GWGR
|
|---|
| |