| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3871 |
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| Symbol | |
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| ID | 4071023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4582231 |
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| End bp | 4582821 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637985895 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_592945 |
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| Protein GI | 94970897 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGAAG CGCGTCAGCA ATACGAACTC GGGATGGGTT GCATTGCAAA GAGCGAATAC
CGTCGCGCTC GCAAACACCT GCGCAAGGCC GTCGAGATGG AACCGACGGC CGCGAACTAC
CACCTCGGAC TGGGGGAATG TTATTTCTTT CAGGAACCGC CGGACTATCC CGCCGCGATC
GCAGAATTTA AAAGGGCTGT CGAACTGAAA CCAAGCTGGG CTGATGGATA CCTGTGGCTC
GCCAACGCCA TGATGGAGAA TGGAGAGGCA GAAGCTGCGG TTTCATACTA TGAACGGGCC
GGGGAATTCG CACCGGATGA CCCCCGTCCC GCAATTTCAC TGGGTCGTTG TTTCGCGAAG
CTCAAGCGTT ATGACGATGC GATTAGAATG TTCCGTCGGG GTATTGAGCT AAAGCCACAT
TACGGAAAAG CCTCGGCTCA TCTTTTCCTC GCCGAGGCAT TGCTCGCTTG TCGAGCCATC
GATCAAGCGC GCCGAGAGTG GGAGGTTGTC TTAACGCTGA AACCCATGTA TCCCGAGCAC
GAATCTGCCG CAGACACCGC GCGCGAAATG CTCGCAAAAC ACAAACGCTA G
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| Protein sequence | MEEARQQYEL GMGCIAKSEY RRARKHLRKA VEMEPTAANY HLGLGECYFF QEPPDYPAAI
AEFKRAVELK PSWADGYLWL ANAMMENGEA EAAVSYYERA GEFAPDDPRP AISLGRCFAK
LKRYDDAIRM FRRGIELKPH YGKASAHLFL AEALLACRAI DQARREWEVV LTLKPMYPEH
ESAADTAREM LAKHKR
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