Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3818 |
Symbol | |
ID | 4071102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4514348 |
End bp | 4515550 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637985841 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_592892 |
Protein GI | 94970844 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.361845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCGTA ATTTCAAAAT TCTGGAACGT AGGGCTCCAC ATTCTGTCGG CGAGTGGCCC TCTTTCGACG AAGAAGATAT TCGCTCGGTC GAGTCGGTCC TTCGTTCCGG CAGAATCAAT TACTGGACAG GCGAAGAATG CCGACGGTTT GAGAGGGAAT ATGCGACACA CGTTGGTACC AAGCATGCTA TTGCTCTTAC CAACGGCACG GTTGCACTGG AACTCGCGCT GCGAGCGCTT GGTATTGGTC CCGGCGACGA GGTTATAACG TCTGCGCGCA CATTCATCGC CTCCGCGAGT TGCGCCGTTG CCGTGGGAGC GACCCCGATC ATCGCGGATG TCGATCGCGA CAGCCAGAAT ATTACTGCCG ACACTATTCG GAAAGTCGTT ACCCCGAAAA CCAAGGCCAT CATCGCCGTG CACCTCGCCG GCTGGCCTTG CGAAATGGAT TCGATTCTTG CCTTGGCTGC GGAATACGGG CTGAAAGTCG TGGAAGACTG TGCGCAGGCC AACGGAGCCC GTTACAAAGG GCAAGTCGTT GGTTCCATCG GAGATGTCGG CGCTTTTTCG TTCTGCCAGG ACAAGATCAT CACAACTGGT GGCGAGGGTG GACTGATCAC ACTGAATGAC GATGAAATGT GGAAGTTCGC CTGGGCATAT AAAGACCACG GCAAGAGTTA CGAAGCTGTT TACAACCGCG ATCACCCACC GGGTTATCGG TGGTTGCACG AGTCATTTGG CACGAATTGG CGCATGACGG AAATGCAAGG CGCCCTCGGA AGGAACGCTC TCCGGCGGTT GGATTCATGG GTTAAGACTA GGCGCCAGAA TGCTTCTACG TTGAAGAAGG CGTTCGCCGG TATTCGTGCA GTGCGAATTC CTGAGCCTCC GCAAGATTTT TATCACTCGT ACTACAAGTT CTATGCGTTC ATTGAACCGC ATGCTCTGAA ACCGGAATAT AGTCGGGACC GTATTGTTCA AGAGATCAGC GAACTAGGGT ATCCGTGCTT CGTGGGGAGT TGTAGCGAAA TCTATCTTGA AAAAGCGTTT GAGGCCGCGG GCTACCGAGG CGAAATTTTG CCGGTTGCTC GTGAACTTGG TGATACGAGT CTGATGTTCC TTGTGCACCC GACGATAAAT GAAAGTCAAA TGGACGAATA TGCTGATATC TCAAGTCGGG TTCTGAGGAG TGCGAGTCGA TAG
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Protein sequence | MYRNFKILER RAPHSVGEWP SFDEEDIRSV ESVLRSGRIN YWTGEECRRF EREYATHVGT KHAIALTNGT VALELALRAL GIGPGDEVIT SARTFIASAS CAVAVGATPI IADVDRDSQN ITADTIRKVV TPKTKAIIAV HLAGWPCEMD SILALAAEYG LKVVEDCAQA NGARYKGQVV GSIGDVGAFS FCQDKIITTG GEGGLITLND DEMWKFAWAY KDHGKSYEAV YNRDHPPGYR WLHESFGTNW RMTEMQGALG RNALRRLDSW VKTRRQNAST LKKAFAGIRA VRIPEPPQDF YHSYYKFYAF IEPHALKPEY SRDRIVQEIS ELGYPCFVGS CSEIYLEKAF EAAGYRGEIL PVARELGDTS LMFLVHPTIN ESQMDEYADI SSRVLRSASR
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