Gene Acid345_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3788 
Symbol 
ID4071072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4475174 
End bp4475845 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID637985811 
Productbifunctional ADP-heptose synthase 
Protein accessionYP_592862 
Protein GI94970814 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGATG TGTCGGGTGC CGGCGATACG GTGATTGCGA CTCTCGCGGC TGGATTGGCG 
TCTGGGATGG CGCCCATCGA CGCCATTGAG CTCGCGAATC TCGCCGCTGG CGTCGTTGTC
GGAAAGGTAG GCACCGCGCC GATCCTCCAG CACGAACTCA TAGCTGAGCT GTCGGTCGAG
TTACAGACCC ACTTTGGCGA CAAGATCCTC ACACGCGAAG CTCTGGCTGC CCGCGCCCGC
GCATGGCGTG CAAACGGAGA CCACATCGTT TTCACGAACG GCTGCTTCGA TTTGCTGCAC
GTAGGACACG TGACGTTGCT GGAAGAAGCG CGCCGCTTGG GAACCAGACT GATTGTCGCC
ATCAACAGCG ACAAGTCGGT TTCCAAGCTG AAGGGCGAGT CCCGTCCACT GGTTGGCGAA
AAGGAGCGCG CAAAGCTGCT CGCCGCCCTT GCGTCGGTTG ATGCTGTTAC GATCTTCGAC
GAATCTACTC CGCTCGAGTG CATCAAAGCA CTACAGCCCG ACGTTCTCGT TAAGGGGGGC
GACTACTCGG AGGAAACCAT CGTCGGTGCA GCGGAAGTGA AGTCGTGGAA TGGGCGAGTG
GTGATTGTTC CCACGGTCCC GGGCTTCAGC ACGACGAGCC TGATATCGAA GATGACGACT
TCGGGAAAGT AG
 
Protein sequence
MFDVSGAGDT VIATLAAGLA SGMAPIDAIE LANLAAGVVV GKVGTAPILQ HELIAELSVE 
LQTHFGDKIL TREALAARAR AWRANGDHIV FTNGCFDLLH VGHVTLLEEA RRLGTRLIVA
INSDKSVSKL KGESRPLVGE KERAKLLAAL ASVDAVTIFD ESTPLECIKA LQPDVLVKGG
DYSEETIVGA AEVKSWNGRV VIVPTVPGFS TTSLISKMTT SGK