| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3755 |
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| Symbol | |
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| ID | 4069330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4435635 |
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| End bp | 4438724 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637985777 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_592829 |
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| Protein GI | 94970781 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0174443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTACTG TCTCCGCGTT CACCGAATCT GTGGTCGAAG AGGCGGCGCT TGCTTGGTTG
GAAGGGCTGG GCTACACGGT ACTTTCCGGC CCAAGCATTT CTGCTGGAGA AATTGCCGCC
GAGCGGATCG AGGCTGATTA CTCCGACGTT ATTCTTGAGC GGCGCGTTAG ACAGACACTG
CAACGCCTCA ATCCTAATCT CCCACCAGAA GCGTTAGACG ACGCGTTCCG CAGGCTCACT
CACGACAATG AAACGTCTTT GATCGCTAAT AACCATGCCT TTCATCAGAT TTTGGTGAAT
GGCGTTACCG TTGAGTACAA CCGAGCCGAT GGTTCCATCG GCGGAGCCTT GGTGCGCGTT
ATTGACTTTG AGGCTGCCGA AAACAACGAC TGGCTCGCGG TGAACCAGTT CACGATCGTG
GAGGGACAGT ACACGCGGCG ACCTGACGTG CTGATATTTA TCAATGGTCT CCCGATCGCC
TTGCTGGAAC TCAAGAACGC TGCCGACGAA AATGCCACCA TTTGGACCGC GTTCAAGCAG
ATTCAGACGT ACAAATCCCA AATTCCATCG TTGTTCGCCT ACAACGAACT GCTCGTGATC
TCCGATGGTA TGGAGGCACG AGTCGGATCG CTCACTGCTG ATACAGAGCG GTTCATGCCT
TGGCGCACAA TCGGAGGCGA AGAGCTTGCC CCGACATCTC TGCCGCAGCT TCAGGTGTTA
ATCGAGGGGC TTTTCGAAAG GCGCCGTTTA CTTGACTTCA TACGTCACTT TGTCGTCTTC
GAAGACGAAG GACGCGGGGT GTTGATCAAG AAGATTGCTG GATATCATCA GTTCCACGCC
GTCAATAGGG CGTTAAGAGA GACGCTGTCC GCATCGGCGG AAGGCGGCGA TCGCAGAGTG
GGAGTGGTGT GGCACACACA GGGAAGCGGC AAGAGTCTCA CGATGGCTTT TTATGCCGGG
CGCCTTGTAC TTGAGCCGAC TCTTCAAAAT CCCACCATCG TCGTGATAAC AGATCGTAAC
GACTTGGACG ATCAACTTTA CGGGACATTC TCTCGCTGCC ATGAGTTGTT GAGACAGGCT
CCGCTACAAG CCCTGGATCG AGAGCACTTG CGGTCACTGG TTCAAGTGTC GTCCGGAGGC
GTGATCTTCA CAACAATCCA GAAATTCATG CCGGCGGAGG GCGACAAATA CCCGCAGCTT
ACAGATCGTC GCAACGTGAT CGTCGTCGCT GACGAGGCAC ATCGTAGTCA ATACGACTTT
ATAGATGGGT TTGCGCGGCA CATGAGGGAT GCCTTACCCC ACGCCTCATT TATTGGCTTC
ACAGGTACAC CCATCGAAAA GACCGATGTA AATACGCGCT CCGTCTTCGG CGATTACATC
AGCATCTACG ACATCCAGCG AGCCGTCGAA GATGGGGCGA CTGTGCCGAT CTACTACGAG
AGCCGTCTGG CGAAGCTCGA ACTCCCTGCT TCAGAAAAGC CCAAGGTCGA TACGGCTTTC
GAGGAAGCCA CAGAAGGCGA AGAGGTCGAT CGCAAAGAAA AGCTCAGGAC GAAATGGGCC
GCTGTGGAAG CCGTTGTGGG AACCGAGAAG CGGCTCAATA CGGTTGCTAA AGACCTCGTA
AAGCACTTCG AAGAGCGGCT AGAGGTCATG GACGGCAAAG CAATGATTGT CTGTATGAGC
CGCCGAATCT GCGTTGACCT GTACAACGAG ATTATGAAAC TTCGTCCAAC GTGGCACAGC
GAGAACGATG ATGCCGGAGT GCTCAAGATC GTGATGACGG GGTCAGCAAC GGACGGGCCC
GAGTGGCAAC AGCACATCAG GGACAAGCGA CGGCGTGAAG CGTTAGGTAA GAGATTTAAG
AATGCTAAAG ACCCATTCAA GATCGTGATC GTAAGGGATA TGTGGCTTAC AGGATTCGAC
GTTCCATCGT TACACACGAT GTACGCAGAC AAGCCGATGC GAGCGCATGG GCTGATGCAG
GCGATTGCCC GAGTCAACCG CGTGTTCAAA GACAAGCCCG GCGGACTGGT TGTGGACTAC
CTCGGCATCG CGCACGAACT CAAGCTTGCG CTGGCCACGT ACACAGAAAG CGGTGGAAAG
GGCCAGACGG CGCTGCCGCA GGAAGAGGCT GTCGCAAGGA TGATCGAGAA ATATGAAATC
TGTCGGGGAT TATTCCACGG GTTTGACTGG TCAATGTGGC TCACCGGGAC CTCCGCGCAG
AAGCTCGCGA TTCTTCCTAA CGCCCAGGAA CACGTCCTGA AACAGGAGGA CGGAAAGAAC
AGACTGTTGA AGGCGGTGTC AGATTTGTCA AAAGCATTCG CATTGGCTGT GCCCCACGAT
GCAGCTTTGA AGATTCGTGA CGATGTAGGC TTTTTCCAAG CAATCCGAAG CGTCTTGGCC
AAAACCGCTT CGCAACAGTA TCGTCCCGAG CAAGAGCTCG ATAACGCAAT TCGCCAAATC
ATATCCAGAG CGATGTCCTC TGGCGAAGTG GTGGATATTT TCGCAGCTGC GGGCCTTAAG
AAGCCCGATA TATCGATTCT TTCCGAAGAG TTCCTGAGAG AGGTCAGCAA CATCCCACAG
AAGAATCTCG CAGTAGAGCT GCTACGCAAG CTGCTCAATG ACGAGATCAA AAGTCGATCG
CGGCGCAACG TCGTGAAGGG CAAGCTCTTC TCCGCAATGT TGGAGAGCTC GATTCATAAG
TATCAGAACC GGGCTATTCA GGCCGCTCAA GTCATTGAGG AGTTAATCGG ACTCGCGAAG
GAGATGCGAG AAGAGTCGGC AAAAGGCGAG GAACTGGGCC TAAGCGAAGA CGAGGTGGCT
TTCTACGATG CACTCGAAGT CAATGACAGC GCCGTCAAAG TGCTTGGTGA ACCAACTTTG
AAGACTATTG CGCGCGAGCT TGTGGACACC GTTCGCCGAA ACACGACGAT CGATTGGGCC
GTGCGCGAGA ACATCCGTGC GAACCTGCGT GTGCTGGTGA AACGCATCCT GAGGAAGTAT
GGATACCCGC CAGACAAGCA GGAGAAGGCG ACCCTGACTG TGCTGGAGCA GGCGGAAGCG
TTGTCAGCGA ATTGGGCGGT GACTACGTAA
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| Protein sequence | MTTVSAFTES VVEEAALAWL EGLGYTVLSG PSISAGEIAA ERIEADYSDV ILERRVRQTL
QRLNPNLPPE ALDDAFRRLT HDNETSLIAN NHAFHQILVN GVTVEYNRAD GSIGGALVRV
IDFEAAENND WLAVNQFTIV EGQYTRRPDV LIFINGLPIA LLELKNAADE NATIWTAFKQ
IQTYKSQIPS LFAYNELLVI SDGMEARVGS LTADTERFMP WRTIGGEELA PTSLPQLQVL
IEGLFERRRL LDFIRHFVVF EDEGRGVLIK KIAGYHQFHA VNRALRETLS ASAEGGDRRV
GVVWHTQGSG KSLTMAFYAG RLVLEPTLQN PTIVVITDRN DLDDQLYGTF SRCHELLRQA
PLQALDREHL RSLVQVSSGG VIFTTIQKFM PAEGDKYPQL TDRRNVIVVA DEAHRSQYDF
IDGFARHMRD ALPHASFIGF TGTPIEKTDV NTRSVFGDYI SIYDIQRAVE DGATVPIYYE
SRLAKLELPA SEKPKVDTAF EEATEGEEVD RKEKLRTKWA AVEAVVGTEK RLNTVAKDLV
KHFEERLEVM DGKAMIVCMS RRICVDLYNE IMKLRPTWHS ENDDAGVLKI VMTGSATDGP
EWQQHIRDKR RREALGKRFK NAKDPFKIVI VRDMWLTGFD VPSLHTMYAD KPMRAHGLMQ
AIARVNRVFK DKPGGLVVDY LGIAHELKLA LATYTESGGK GQTALPQEEA VARMIEKYEI
CRGLFHGFDW SMWLTGTSAQ KLAILPNAQE HVLKQEDGKN RLLKAVSDLS KAFALAVPHD
AALKIRDDVG FFQAIRSVLA KTASQQYRPE QELDNAIRQI ISRAMSSGEV VDIFAAAGLK
KPDISILSEE FLREVSNIPQ KNLAVELLRK LLNDEIKSRS RRNVVKGKLF SAMLESSIHK
YQNRAIQAAQ VIEELIGLAK EMREESAKGE ELGLSEDEVA FYDALEVNDS AVKVLGEPTL
KTIARELVDT VRRNTTIDWA VRENIRANLR VLVKRILRKY GYPPDKQEKA TLTVLEQAEA
LSANWAVTT
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