| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3647 |
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| Symbol | |
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| ID | 4072250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4315652 |
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| End bp | 4318117 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637985670 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592722 |
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| Protein GI | 94970674 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.737099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG GAAAGGAGTT CGGAATGGCG AGAGTGAAAC AGGACCTACG CTATGCGCTG
CGTCACCTGC TGCGCAGCCC GGGATTCACC GTGTCGGCAG TGATCACACT GGCGCTTGGC
ATCGGCGCGA ACCTCGTCGT GTTCCTGCTG CTCTACGGCG TCATTCTGCG ACCATTGCCG
TTCTCGCATC CTGAACAGTT GGTGCGTATC GCACGCGCTT ACCCCGGCAG TGGCGACAGC
AACGCCTATT CCGCGACCAA GATCCTTTTT TTCTCGCGCA CCAATCGCAG CTTTGAGTCT
GTCGCCGGCT ACGACTACTT TCCACACAGC GTGAATTTGA TGGAGCAGCA GGCCGCGATT
CCGCTGCAAT CGCTGGGTGT GTCCTCGAAC TTCTTCCACG TTTTTGCCAT GGAGCCCATG
CTCGGTCACG GCTTCGCCCC GGAAGACATG CAACCCGGCG CCGCTGGCGT CGCAGTGCTC
AGCGATGCCA CTTGGCGTCG CCAGTTCAAT GCCGATCCCA ATATCGTGGG ACGAGCGATC
ACTCTCGGCA GCGAGAAGTA CACCGTCGTC GGGGTTGCGA ACCCAAAGTT TCAGCTCGAT
AACAAGATCG ATATCTGGAC CACTCTGCAC CTGAAAGAAG ATGCCGAGAA CCACGACAAC
AATTACAACG TCGTGGCGCG ACTCAAGTCC GGCGTAACTC CCGCCATGGC GCAGGACGAC
CTGAAGCGAG TTTTGCTTCA GTTGAAAGAT ACCTATCCCG ATTTATGGTC AGCCCAGGAA
AGCGCTCATG TTTGGGACTA CCACGCTTCG CTCGTTGGTG ACGTGAAGCC TGCGCTCAAC
ATCCTGATGG GAGCAGTCGG AATTCTTCTC GTGGTCGTGG CCGCGAACAT CCTCAGCCTC
TTGTTAACGC GCGCGATTTC CCGTCGCCGT GAGATGAGCG TTCGCGTCGC GCTCGGCGCC
ACCGGCGGAC GACTGCTGCA GCAAATGCTC GTCGAGAACT TGTTGCTCTG CGCGCTGGGC
GCTGTCGCCG GAATCGCGCT CGCGCAATTT ACCGCGCCGG TCATCCTGCA TCTCACGCCG
ATCCAGTTGC CGGCTTTCGC TTCGCTGCAC GTTGGATCTT CCGGCGTGGC CTTCGCTGCT
GGCCTCGCAG TGCTTTGCGC CGTTCTGTTC AGCCTCGTGC CGGCATTGGA ATCGCGCCGT
GTGCACTTGA ACGATTCTTT GCGCTTGAAC ACCACGCGCA TCGCCCCGGG ACGAGTGCCC
GCGCAGCGCG TGCTCGTGGT TGGCGAAGTG GCGATGTCGT TGGTTCTACT CGTCGCCGCA
GCTTTGTTGC TCGGAAGCTT CTGGAAGCTG GTGCATATCG CGCCGGGCTT CGATCCCGCG
AACACCGCAA CCTTCAAGAC CGGCTTGTCT GTCGCACAGA CGTCTACTGG CGCCGCGTTC
GGCCAGACGC TCGACACGCT TGCGGCGCAT ACCGAAGCGC TGCCCGGTGT GGAGTCGGCG
GCTGCGGTCA TCGGCGCGCC AATGGAGCCC GTGCCTGATC TTCCGTTCGA CATCGCGGGC
CGTCCCGCAC CCAGCGACGG CAGCTCGTAT GACGAGAAGT ACGTTCCCAT CACTGCCGAC
TATTTCACGA CTCTGAAGAT TCCTGTCGCC GCAGGCCGCG CTTTCACCAT GGCCGACAAC
AAATCGTCGG CGCCGGTGCT GATCGTCAAC GAACAATTCG TGCACACCTA CTTCCCGAAG
GAAAATCCGA TCGGCCAGCA TGTTCAGATC GGCAAGGCGA TGGGACCAGA TTTCGCTGAT
CCCGTTCGCG AGATCGTTGG TGTGGTCGGC AACGTGAAAC AGCTCGGGCT CGAGCAACGT
GCGCCAGAAA TGATGTATCT GCCTGCCGGA CAAGTTCCCG ACAAAATGGT CCAGTTGATC
GGCCAGTCGC GCGGGATGAC CTGGGTCGTG CGCAAGAAGT CCGCGAATGT GGATCTCGCG
AATGCGCTGC GCGGTGTCTT TCTCGACACC GCACAGTTGC CCATCGCGGG CATGACGACG
ATGGACCACC TGATGAGCGA TTCCGTGGCG CAGCAGCGCT TCAGCATGAT GCTGCTCTCC
GGCTTCGGCC TGATCGCGCT CTTCCTCGGC GCCGCGGGTC TCTATGGCGT GATGTCGTAC
ACCGTCGCGC GCCAGACCAA AGAGATTGGC GTCCGCATGG CGCTTGGCGC GGCGCGTGGC
GACATCCTAC GCATGGTTTT GCGCGAGGCC GGAATCCTCG TCGGAATCGG ACTTCTCGTT
GGAGTGCTGG CCTCGATTGC CGGCGGCCGC CTCATGAGCA GTATGTTGTT TGGCGTTGCC
CCGCGCGATC CTATCGCTCT CTTGGCGGGC AGTGGAGTCC TGCTACTGAC GGGTTTGTTC
GCTGCATGGT GGCCGGCCCG GCGCGCAGCC TCCACCGAGC CGATGGAAGC TTTGCGCATC
GAGTAG
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| Protein sequence | MATGKEFGMA RVKQDLRYAL RHLLRSPGFT VSAVITLALG IGANLVVFLL LYGVILRPLP
FSHPEQLVRI ARAYPGSGDS NAYSATKILF FSRTNRSFES VAGYDYFPHS VNLMEQQAAI
PLQSLGVSSN FFHVFAMEPM LGHGFAPEDM QPGAAGVAVL SDATWRRQFN ADPNIVGRAI
TLGSEKYTVV GVANPKFQLD NKIDIWTTLH LKEDAENHDN NYNVVARLKS GVTPAMAQDD
LKRVLLQLKD TYPDLWSAQE SAHVWDYHAS LVGDVKPALN ILMGAVGILL VVVAANILSL
LLTRAISRRR EMSVRVALGA TGGRLLQQML VENLLLCALG AVAGIALAQF TAPVILHLTP
IQLPAFASLH VGSSGVAFAA GLAVLCAVLF SLVPALESRR VHLNDSLRLN TTRIAPGRVP
AQRVLVVGEV AMSLVLLVAA ALLLGSFWKL VHIAPGFDPA NTATFKTGLS VAQTSTGAAF
GQTLDTLAAH TEALPGVESA AAVIGAPMEP VPDLPFDIAG RPAPSDGSSY DEKYVPITAD
YFTTLKIPVA AGRAFTMADN KSSAPVLIVN EQFVHTYFPK ENPIGQHVQI GKAMGPDFAD
PVREIVGVVG NVKQLGLEQR APEMMYLPAG QVPDKMVQLI GQSRGMTWVV RKKSANVDLA
NALRGVFLDT AQLPIAGMTT MDHLMSDSVA QQRFSMMLLS GFGLIALFLG AAGLYGVMSY
TVARQTKEIG VRMALGAARG DILRMVLREA GILVGIGLLV GVLASIAGGR LMSSMLFGVA
PRDPIALLAG SGVLLLTGLF AAWWPARRAA STEPMEALRI E
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