| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3645 |
|---|
| Symbol | |
|---|
| ID | 4072248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4313140 |
|---|
| End bp | 4313784 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637985668 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592720 |
|---|
| Protein GI | 94970672 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.784319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.81819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTA TCCTCAATCC CGAATCTGCC CGGGTGCTTG GCTGTTTGAT CGAGAAAGAA
ATCACCACGC CGGAGTACTA TCCGCTCTCG CTGAATGCGC TTATCAACGC GTGCAACCAG
AAGTCAAACC GCGATCCTGC GATGTCGCTC GACGAAGACT CGGTGCGCGT GGCGCTGCGG
AACCTGACCG ACAAAGGGCT GGCGCGGCAT GCACCCTCCG AGGGGCGGGT GCCGAAGTAC
GAGCACGATG TGAACAACGC GATGCAACTC AGCCGTCGCG AGGTCGCCAT CCTCTGCGAG
CTGTTGCTGC GGGGGCCGCA GACGCCAGGC GAGTTGCGCG GGCGCGCCGA GCGGATGTAC
AAGTTCGAAG GAATAGAGGA CGTGCACTCG ACGCTGCAGC GGCTGATGGA GCGCGATCCG
GCGCTCGTTG TTGTGCTTCC CCGCCAGCCC GGGACGAAAG AAGCGCGCTA CACGCATACA
TTGATGCCTG TCGATATGCA GCCGCAGCCG GCGGTCGAAG TATCGCACTC CGTGAGCGGC
GGGAATGATG GGCGCATCGC GCAATTGGAA GCGGAAGTGC GGGAATTGCG CGCGGAAATC
GAAACTCTAA AAGAACAGGT GAAGTCGCTC ACTCCGGTGA ACTGA
|
|---|
| Protein sequence | MTLILNPESA RVLGCLIEKE ITTPEYYPLS LNALINACNQ KSNRDPAMSL DEDSVRVALR
NLTDKGLARH APSEGRVPKY EHDVNNAMQL SRREVAILCE LLLRGPQTPG ELRGRAERMY
KFEGIEDVHS TLQRLMERDP ALVVVLPRQP GTKEARYTHT LMPVDMQPQP AVEVSHSVSG
GNDGRIAQLE AEVRELRAEI ETLKEQVKSL TPVN
|
|---|
| |