Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3641 |
Symbol | |
ID | 4070161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4310710 |
End bp | 4311342 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985664 |
Product | negative transcriptional regulator |
Protein accession | YP_592716 |
Protein GI | 94970668 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.691719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.578419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCATTC GCGAACGCTA CGCCGCCTCG CAGGAAGACA TCCTCGCCAC CATTCGCCAG TATCCTCTTG CTACGCTCGT AAGCCAGGAT GCACGGGGTT TCACCGCGAA CCATCTGCCG CTGGTGATTG ATCCTGCGCG CGGACCGCAT GGGACGCTGA TTGGGCACTT CACGCGGCAG AACCCACAGC ATGCGGCTTT GCGAGCTGAT TCGCGGGTGA TGGCGGTGTT CAACGGGCCG GCGGGATATG TCTCTTCGAG TTGGTACTCC ACCGGGCGCG ACATGGCGCC GACGTGGAAC TATGCTGCCG TGCATTGCCA CGGCACGCTG ACGCTGGCAT CCAGCGAAGA GCAGACGGTC GCGGCACTGC GCGCGCTACT CAATCATGTT GAGCAGAACA TGCCGAATGC TTGGCGCATG GAGGAACTCG GACCCGATGG GCTGGAACGT CGACTGCCGC ACATTATCGG GTTCGAGATT GCGATCGAGC GCATTGAAGC GAAGCTGCAG ATGAGCCAAT ATGAGCGGCC CAAGGACACG GCGGAGGCCA TCGACGTGTT ACGGGCGCAA GGACAGGAAG ATCTTGCGGA TACGATGCAG CGGTGCAACT TCGGGCAGAA GCATTCGCAG TGA
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Protein sequence | MFIRERYAAS QEDILATIRQ YPLATLVSQD ARGFTANHLP LVIDPARGPH GTLIGHFTRQ NPQHAALRAD SRVMAVFNGP AGYVSSSWYS TGRDMAPTWN YAAVHCHGTL TLASSEEQTV AALRALLNHV EQNMPNAWRM EELGPDGLER RLPHIIGFEI AIERIEAKLQ MSQYERPKDT AEAIDVLRAQ GQEDLADTMQ RCNFGQKHSQ
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