| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3609 |
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| Symbol | |
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| ID | 4070129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4269325 |
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| End bp | 4271874 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637985632 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592684 |
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| Protein GI | 94970636 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.123947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGC TCGCACAAGA CATTCGCTAC GCTCTCCGGC AGATGCGGCT CTCGCCCGGC
TTCACGGTCA CGGCGATCCT CACCCTGGCT ATCGGCATTG GCGCCACCAC GGCCATCTTC
ACCTTGATCA ACGAGATCAT GCTGAAGTCG TTGCCGGTCG CTGAGCCCGC GCAGCTCTAT
CGCATTGGCG ATACCAACGA GTGCTGCAAC GAGGGCTGGG AAGACGATGA CTGGAGCCTC
TTCTCGCACC AACTCGTCCG GCGTTTCGCG GAAGCCACGC CGGAGTTCGA GGAAGTCACT
GCGTTCCAGG CCTCGCCGGA GACGGAAGGC GTTCGCAGCA GCGTGAAGGA CCAGGTCGCT
CGCCCGATGA AGATGGAATT CATCGACGGC CACTACTTCC ACGTCCTCGG CATCAACCCG
TTCGCGGGCC GCGTGATTCA GCTCTCCGAC GACCAGCGCG GCGTCGCGCC CGTCGCGGTC
ATGAACTACG CAACCTGGCA GCAGACCTAC GGCTCCGATC CGTCGCTGAT CGGCTCGACC
TTTGTGATTG AAGGTCATCC CGTCACGCTG GTCGGTATCG CGCCTCCCGG CTTTTACGGC
GACACTCTGC GCAGCCGCCC TCCCGATTTC TGGTTCCCGA TCCAGCAGGA GCTCCTGATT
GACGGTCCCG ACGGCCGCAT CAAGGACGAG CAGCAACAAT GGCTCTATGC CATCGGGCGG
CTAAAGCCCG GCGCCAGCGT GCAAGGCCTC GATGCGCGAC TCACGACGGT GCTCCAGCAC
TGGCTCAGCG ATGAAGATCC GATCCCAGCG GTCTTCCGCA CCATGGCCCT CACCACCGTT
CCGCACAAGT TCATCAAGAT GTCGCCGGCC GGCTCCGGCA TTGCCTCGAT GAAGAGCAAC
TACAGCACGA ACCTGCGGAT CCTGTTGCTC GTCTGCCTGA CGGTGTTGCT CATCGCCTGC
GCCAACATCG CGAATTTGCT GCTCGCGCGC AGCACCGCGC GCCGCGGACA CACTGCGATG
CGCATGGCAC TCGGCGCCAC TCGCACACGC TTGATACGCC AGCAACTCAC TGAAGCCGTA
ACCCTCGCGG TTTGCGGCGG ACTGCTCGGC ACTCTCGTTG CCTTCGGTGG CGCACGTCTC
ATGCTCGCGT TGGCGTTTCC GCAAGCAAAG GCCAGCCCCA TCAGCGCGAC ACCATCGTGG
CCGGTGCTTG GTTTTGCGTT TGCTTTATCC CTGCTGACGG GAATCATCTT CGGCGTGGTG
CCGGCGTGGT TCTCCAGTCA CTCCGACCCG GCAGAAGCCC TGCGCGGCGC CAACCGCTCG
ACGAAAGATC ACGCCACTCT GCCGCAGAAA CTGCTGGTCA TCGCCCAGGC CGCGATGTCA
CTTGGCCTGC TCGCGTGCGC TGGACTGCTC ACCCAAAGCC TGCTCAATCT TCAACGCCAG
GACTTCGGCT TCGTTCCCGA AAACCGCGTG ATTGTCAGCA TGAATCCGCC GTCGCCGACG
CACACGGTGC CGCAGCTGAC ATCGCTTTAT CGTTCGCTGC AAGACCGGCT CTCGCAAATC
CCAGGCGTAC AGGGCGTCAG CTTCGCGCTC TATTCGCCGA TGGAGGGGAA CAACTGGGGC
GAGTTGGTCG CCGTGGAAGG CCGCGGTGAG CCCAAGGCGA ACATGGAAGA CGCCGCCTCC
TGGGACCGCG TCAGTTCTAA TTACCTGCCG ACGATCGGCC AGCAGATCCT GCGCGGCCGC
AACTTCCAGA GCAGCGATTC CGGCGGACAT CCCGTAGCTA TCATCAACGA AGCCTTCGCG
AAGACTTTCT TCCCCGGTGA AGACCCGATG GGCAAGCACT TCGGCATGGA TGCCGCGAAG
TTTGCCTCGA TGTACGAGAT CGTCGGTATT GCGCGCAATG CCAAGTACGG CGATCCTTCG
GAGCCAGCGC GGCCGTTCTT CTACGTCTCG CTTGAGCAGA GCGAGCATGC TGACGATCCA
CTGATGCAGA TGATGGTCGT TCGCTCGCAC TTCATGCAGA GCATCCAGCT TCTGGTCGGC
GGCAACGTTG AAAACATTGA ACCGCAGATC CGCCGCGCGG TCGCCGAAAT CGATCCCACG
ATCACGCTCA TCAGCGTGCA GACCATGCAC GAGCAGGTCG CGTCGAACTT TAACCAGGAG
CGCATGGTCG CGAACCTCGC CGGCATCTTC GGCGGAATCG CGCTGCTGCT CGCGGCTATC
GGCCTCTACG GAATGACCGC GTATAGCGTG GTTCGACGCA CCGCGGAAAT CGGCGTCCGC
ATGGCGCTCG GCGCGAACCG CCTGAACATT GTGCAGATGG TGCTGCGGGG CGCGTTCGTG
CAAGTTGCGA TCGGACTGGT CCTCGGTATT CCGCTGGCGA TGTTCGCTGG GCACTTCATG
GCCTCGAAGC TTTTCCAGGT GCGCGCCTAC GATCCTCTGG TCCTCGGCGG ATCCATAGTC
GCCCTCGCCC TGTGTGCCGC GATCGCGAGC ATCTTGCCCG CACGCCGGGC GGCATCGACG
GAACCGATGA AAGCTCTCCG CACGGAATAA
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| Protein sequence | MSTLAQDIRY ALRQMRLSPG FTVTAILTLA IGIGATTAIF TLINEIMLKS LPVAEPAQLY
RIGDTNECCN EGWEDDDWSL FSHQLVRRFA EATPEFEEVT AFQASPETEG VRSSVKDQVA
RPMKMEFIDG HYFHVLGINP FAGRVIQLSD DQRGVAPVAV MNYATWQQTY GSDPSLIGST
FVIEGHPVTL VGIAPPGFYG DTLRSRPPDF WFPIQQELLI DGPDGRIKDE QQQWLYAIGR
LKPGASVQGL DARLTTVLQH WLSDEDPIPA VFRTMALTTV PHKFIKMSPA GSGIASMKSN
YSTNLRILLL VCLTVLLIAC ANIANLLLAR STARRGHTAM RMALGATRTR LIRQQLTEAV
TLAVCGGLLG TLVAFGGARL MLALAFPQAK ASPISATPSW PVLGFAFALS LLTGIIFGVV
PAWFSSHSDP AEALRGANRS TKDHATLPQK LLVIAQAAMS LGLLACAGLL TQSLLNLQRQ
DFGFVPENRV IVSMNPPSPT HTVPQLTSLY RSLQDRLSQI PGVQGVSFAL YSPMEGNNWG
ELVAVEGRGE PKANMEDAAS WDRVSSNYLP TIGQQILRGR NFQSSDSGGH PVAIINEAFA
KTFFPGEDPM GKHFGMDAAK FASMYEIVGI ARNAKYGDPS EPARPFFYVS LEQSEHADDP
LMQMMVVRSH FMQSIQLLVG GNVENIEPQI RRAVAEIDPT ITLISVQTMH EQVASNFNQE
RMVANLAGIF GGIALLLAAI GLYGMTAYSV VRRTAEIGVR MALGANRLNI VQMVLRGAFV
QVAIGLVLGI PLAMFAGHFM ASKLFQVRAY DPLVLGGSIV ALALCAAIAS ILPARRAAST
EPMKALRTE
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