| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3591 |
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| Symbol | |
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| ID | 4072813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4242658 |
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| End bp | 4245120 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637985614 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592666 |
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| Protein GI | 94970618 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.171313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.56936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCT TTCGCGACCT GAAAATTGCC GTACGTTCGC TGGCGCGGGC GCGCGCCCTC
TGGATCACCG TGGCGCTTAC GCTGGCGCTG GGCATTGGCG CCAACTCCGC GATTTTCAGC
ATTGTGCGCG CGGTGTTGCT GCGCCCGCTG AACAATCGCG ATGAAGACCG TTTGCTGTAC
GTGCGGCAGA GCGCCTCCGG CCTCGGTCAA ACCGAGACGA ACTGGTCCAT CCCCGAGATT
GATGACATCA GCAAAAACCT CAAGTCGATC TCCGAGATCG GGACGTTCTC CCAGGTGGCC
TTTACCGTGG TTGGCCTCGG AACGCCGCGT GAAATCCCTG CTGGCGTGGT GGATGGCCAC
TACTTTGAAA CCGTCGGCTT GCACCCCGTG CTGGGACGCT TGATTGGACC GCAGGATGAT
GGACAGAATG CGGCCGGCGC AGTCGTGCTC ACGTACAAAT TCTGGACCGG TGCATTGCAC
TCTGATCCCG GCGTGCTCGG GAAGCAGCTT CGGTTGGAGA GTTTTGCCGG CGCGCGGACC
GGGACCGTTG TAGGTGTGCT CGAGCCGTCG GTGCCGTACC CGGTGGAGAC GGAAATCATC
GCCAACCTGG TGACGAGCCC ACACCATCTC TCGGCGACGA TGGTGACCGG CCGCGAGCAC
CGCATGACCG AAGTCTTCGC GCGACTCGCA CCGGGCGCAA CCCTTGAACA AGCGCGTGCC
GAACTCCAGG CGGTGCACAC TGGGATGCTG AAAGCGCATC CGGAGGTCTA TCGTCCGGAG
CATAACTACC AGATCACCGC GACGCGGCTG CATGACCAGA TCAACTCGCG CGCCAACACG
GTGCTGTGGG TTCTGTTCGC GGCGGCTGCG CTGCTGTTCA TCATCGCGTG CTCGAACGTG
GCGAACCTGG TTTTCGCGCG CACGGTCCGG CGCGAGGGCG AGCTTGCCAT GCGCACCGCG
TTGGGCGCGA GTCGCGGTCA GTTGCGTCGC GCGTTACTGG CGGAGAGCGT GGTGTTGTGC
TTCAGCGGGG TGATCGCCGC AATGCTGGTC GCTGCGCCGA TGGTCAGCAT TCTCGGCCGT
TATGCCGCGC GTTTCTCGGT GCGCGCCGAC GGCCTCAAAC TCGATATGAG TTTCGTGTGG
TTCGGGATTG CGCTGGCGAT CGCGGCTTCG ATTTTCCTCG CGTTCATTCC GCGCCTTCCT
GCGGCGCAGG TTTCGCGCAG TCTGAGCGCG GCGGGCGTGG GCACGCGGGT TACGGGCGCC
AACGGCCGAC GGTTGCGGAT TTTTGCGGTG ACGCAGATTG CCGCGTCGTT CCTGCTGCTT
GCGGGCGCGG GCGTGTTGAT GCGGACGCTA TATGAACTGG AGAGCACGCG TCCGCCGTAC
AACTCGGCGA ATGTACTTGC GGTGAATCTG CCGCCGATCG CCTACGGACG CACGCCGGAA
CAGATCCAGA ACTTCGATCG CGATGTAAAG GCGCGCGTGG CAGCGCTACC CGGCGTGGAG
AGCGTGGCCA GTGGCTTCAG CACCCCGTGG CGCGATGCGC AGGGACTGAG CATTGCGTTC
CAGTTTGCGG TAGAAGGTGT GGCGAAGAAG AACGGCGTGG ACGATCCGCG CGCCAAGTTC
CGCTCGATCT CGCCAAATTT CTTCAATACG CTCGGCATGC CCATTATCGA GGGACGCGAT
TTCCGCGACA CCGACAAAGC CGGTGCGGAA CGCGTGGTGA TCATCAGCCA GAGCCTGGCG
AAAAACCTGT TTCCCGGGCA GGAAGCGATT GGCCGCGAAA TCCGCTGGAC GGACAGCGTG
ATGAAGTTCA TCGGCATCAG CTACGAGCCG CGGCGCATTG TGGGCGTGGT GCCCGATGTG
GACGATGAGA ACATCATTCC CGCGCCGGCG ATGACGATTT ATCAGCCGGT GGCGCAGGAG
TGGGTGGCGG CACGTCTGTT CGTGCGTGCT AAGGGCGATC CCTACTCGCT GGTTCCTGCG
ATCACGCGTT CCATCCACGA GATGGACGGG AACCAGCCGG TGGAGCGGGC GGCGACGCTC
AACGATATCC GCGCTGAAGT GCTCACCCCC GACCGTTTGA ACGCGATTGT CTTCGGCGGC
TTCGCGGCGA TCGCGCTGCT GATCTCGGTG GTGGGCGTGG CGGGCGTGCT GGCGTTCTCA
GTGAGTGGAC GCACCCGCGA ATTCGGCATC CGCATTGCGA TGGGCGCGCA ACCGCGCGAC
ATTCTCGGCG GGGTTCTACG CGAAGGTGTG ATTATGGCGG GAATCGGCGT GGCGGCGGGC
GTCGTCGTGG GATTCGCCGC GATGAAGGCC GTCCTGCGCT TCGTTTCCCA ATTGCACATG
CCGAGCATCC TGACGTTGCT CGCGGCGGCG CTGGTGATTG TGGCGGCAGC GGTGATCGCA
TCGGCAATAC CGGCAATGCG CGCGGCGCGA GTGAATGCGG TGGAAGCACT GCGGTCGGAG
TAG
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| Protein sequence | MSFFRDLKIA VRSLARARAL WITVALTLAL GIGANSAIFS IVRAVLLRPL NNRDEDRLLY
VRQSASGLGQ TETNWSIPEI DDISKNLKSI SEIGTFSQVA FTVVGLGTPR EIPAGVVDGH
YFETVGLHPV LGRLIGPQDD GQNAAGAVVL TYKFWTGALH SDPGVLGKQL RLESFAGART
GTVVGVLEPS VPYPVETEII ANLVTSPHHL SATMVTGREH RMTEVFARLA PGATLEQARA
ELQAVHTGML KAHPEVYRPE HNYQITATRL HDQINSRANT VLWVLFAAAA LLFIIACSNV
ANLVFARTVR REGELAMRTA LGASRGQLRR ALLAESVVLC FSGVIAAMLV AAPMVSILGR
YAARFSVRAD GLKLDMSFVW FGIALAIAAS IFLAFIPRLP AAQVSRSLSA AGVGTRVTGA
NGRRLRIFAV TQIAASFLLL AGAGVLMRTL YELESTRPPY NSANVLAVNL PPIAYGRTPE
QIQNFDRDVK ARVAALPGVE SVASGFSTPW RDAQGLSIAF QFAVEGVAKK NGVDDPRAKF
RSISPNFFNT LGMPIIEGRD FRDTDKAGAE RVVIISQSLA KNLFPGQEAI GREIRWTDSV
MKFIGISYEP RRIVGVVPDV DDENIIPAPA MTIYQPVAQE WVAARLFVRA KGDPYSLVPA
ITRSIHEMDG NQPVERAATL NDIRAEVLTP DRLNAIVFGG FAAIALLISV VGVAGVLAFS
VSGRTREFGI RIAMGAQPRD ILGGVLREGV IMAGIGVAAG VVVGFAAMKA VLRFVSQLHM
PSILTLLAAA LVIVAAAVIA SAIPAMRAAR VNAVEALRSE
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