| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3567 |
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| Symbol | |
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| ID | 4072789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4217070 |
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| End bp | 4218341 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985590 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_592642 |
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| Protein GI | 94970594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.756596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATTCG AACTCTTCAT CGCGACCCGC TATCTCCGCG CCAAGCGCCG TCAGGCGGTC
ATCGGCGTCA TCACCGGGAT CTCCATCATC GGCGTGGCCG CCGGCGTCGC ATCGCTCATC
ATCGCGCTCG CGATCAATAA CGGTTTCCGT TCCGATCTCC AGGCGCGTCT GCTCGGCTCC
ATGTCGCACA TCAACCTCAT GCGTCTGCAA AACGACGGCA TCAAGAACTG GCGCGATCTT
CTTGCGAAGC TGGAAAAGCA GCCGCACGTC GTCGCCGGAG CTCCCGCGAT CTACGAACAG
GTCTTGATTT CCCGCGGCGC ACGCGCACAA GGCGCACTCC TCAAGGGCAT CGTTCCCGCC
GATGAACGCC GCGTCAGCGC GCTACTCGAC AACGTGAAAT TCGGATCCGC CGACGCTCTC
GATTCCTCGC AGAACGGCGA AGGCGCGCCC AAGACGCTCT CCGACGAAGT CACGCAATCC
CTGCCGCCGA TCGTCCTAGG CAAAGATATG GCCGACACCC TCGGCGCAAC CACCGGCTCG
GTCGTGCTCG TCACCAGCCC GCAAGGCGAA CTGACCCCCT TCGGCATCGT GCCGAAATAC
CAGCGCTTCA AGGTTGTCGG GATCTTCGAG TCCGGCTTCT ACGACTACGA CTCTTCCTGG
GGCCTGACCC GTCTTGACGA CGCGCAAAAA CTCTTTGGCC TTGGTGACAT CGTCCCCGTC
CTGGAATTCA AAGTAGATGA CATCTATAAA GCCCCGCAGA TCGCCGACCA ACTCGTCGAC
GTCGCCGGCC AGGGCTTCGG CGCCAAGAAC TGGATGGAAC AGAACCAGGC GCTCTTCCGC
GCGCTCCGCC TTGAAAAAGT CGTGACTTTC ATCACCATCG GCCTGATCGT GTTCGTCGCC
GCGCTCAACA TCCTCATCTC GCTCATCATG ATGGTGATGG AGAAGACGAA AGACATCGCC
GTCCTCGTCT CCATCGGCGC ACGCCGCCTG CAAATCCGAC GCATCTTCAT GCTGCAAGGC
GTGCTCGTCG GCGCGGTCGG CACCCTTATC GGTTTGGTCC TCGGCTTCGG CCTCGCCATC
GCCGCCGGCC ACTACCACTG GATCCGCCTC TCCGCCGAGG TCTACGCCAT CGACTACGTC
CCCTTCGCCC CCCGCCTCAT CGACGGCCTA GTCGTCTCCG TTGTCTCCAT CGCGATCAGC
TTCATCGCGA CAATCTACCC CGCGATGAAC GCGTCGCGCG TGCTCCCCGC CGAAGCCCTG
CGCTACGAAT AG
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| Protein sequence | MKFELFIATR YLRAKRRQAV IGVITGISII GVAAGVASLI IALAINNGFR SDLQARLLGS
MSHINLMRLQ NDGIKNWRDL LAKLEKQPHV VAGAPAIYEQ VLISRGARAQ GALLKGIVPA
DERRVSALLD NVKFGSADAL DSSQNGEGAP KTLSDEVTQS LPPIVLGKDM ADTLGATTGS
VVLVTSPQGE LTPFGIVPKY QRFKVVGIFE SGFYDYDSSW GLTRLDDAQK LFGLGDIVPV
LEFKVDDIYK APQIADQLVD VAGQGFGAKN WMEQNQALFR ALRLEKVVTF ITIGLIVFVA
ALNILISLIM MVMEKTKDIA VLVSIGARRL QIRRIFMLQG VLVGAVGTLI GLVLGFGLAI
AAGHYHWIRL SAEVYAIDYV PFAPRLIDGL VVSVVSIAIS FIATIYPAMN ASRVLPAEAL
RYE
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