| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3509 |
|---|
| Symbol | |
|---|
| ID | 4072768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4146130 |
|---|
| End bp | 4146897 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637985532 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_592584 |
|---|
| Protein GI | 94970536 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCA AAGGCAAGCA CGCTTTGATA ACCGGCGGCG ATCAGGGCAT TGGTCGCGGC
ATCGCTCTTC GTTTTGCGCA GGAAGGTGCC GACGTGGCCA TCGGCTTCCT CTCGAATGAT
GATCATGCAA AGTCGGCTGT CGAGGAGATG CGTTCGCATG GAGTGAATGC CGCTGCGTTG
CAAATCGACG TCAGCAACAT CGGCGCGCTG GCAAAGTTCT ATGCCGACGC CACCCGAGCC
CTCGGCCCGC TCGATGTGCT TGTCAATAAC GCCGGCATCG AGAAGCGAGA CGAGTTTCTC
AAGTCAACCG AAGACGACTT TGATTCGGTG ATCGCAGTGA ACCTGAAAGG CCCGTACTTT
CTCTCGCAGT TGTTCGCGCG CGATCTCGCC GAAGCGAAGC GCCCGGGCAA GATCATCAAC
ATCAGCTCCG TCCACGAAGA ACTCCCCTTC CCCAACTTTG CGTCGTACTG CGCGGCGAAG
GGCGGCTTGA AAATGCTCTG CCGAAATCTG GCGATCGAGC TTGCTCCGTA CGGCATCACG
GTGAACAACA TAGCTCCCGG CGCCATCAAG ACGCCGATCA ACGACAAACT CCTGCACGAC
CCCTCAAAAC TAAAGCCCCT GCTTGAGCAC ATCCCGCTGA AACGGATGGG GACGACGGAC
GACGTCGCCG GCTGTGCCGC CTTCCTCGCA TCGTCCGATG CCGACTACAT AACGGGAACA
ACCCTGGTTG TGGATGGTGG CCTCTTGTTC AACTACCACG AGCAGTAA
|
|---|
| Protein sequence | MRLKGKHALI TGGDQGIGRG IALRFAQEGA DVAIGFLSND DHAKSAVEEM RSHGVNAAAL
QIDVSNIGAL AKFYADATRA LGPLDVLVNN AGIEKRDEFL KSTEDDFDSV IAVNLKGPYF
LSQLFARDLA EAKRPGKIIN ISSVHEELPF PNFASYCAAK GGLKMLCRNL AIELAPYGIT
VNNIAPGAIK TPINDKLLHD PSKLKPLLEH IPLKRMGTTD DVAGCAAFLA SSDADYITGT
TLVVDGGLLF NYHEQ
|
|---|
| |