| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3500 |
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| Symbol | |
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| ID | 4072758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4128348 |
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| End bp | 4130819 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985522 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592575 |
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| Protein GI | 94970527 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATTC TGCTCAAAGA TATTCGCGTT GCTCTTCGGA TGCTTGCTGC TGCGCCGGCA
TTCACCCTCA CCGCCGTGCT CTCGCTGGCA ATCGGGATTG GCGTGAACAC CACGATCTTC
AGCATCGTGG ATGGGCTCCT GCTTCGTCCG CTTCCGTACA AAGATGCTGA ACGGTTAGTG
ATCCTTTGGA ACCGCTCGCC CGGCCTCGGC ATTACGGAAG ACTGGTTCTC CACGGCGCAG
TACTTCGACA TCAAGAACGG GCATCATGGT TTCGAGCAGG TCGCGATTGC CATTGGCGCG
AACTATAACC TCACTGGATC GGGCGAGCCG GAGCGCTTGG GCGCAATCCG GGTATCGTCG
AATTTGTTGC CGATGCTCGG ACAGCAGGCA GCCCTAGGGC GAACTTTCGC AGCCGACGAG
GACGTGCCGG GACGCACCGC AACAGCTGTG CTCAGCTACG GAACCTGGAC ACGTCGCTTC
GGGTCCGATC CCGCCGTGCT CGGCAAAAAG GTGATGCTGA ACGGCGCGCC TTACGAAATT
GTCGGCGTGA TGCCGCGATC TTTTTCATTG CCCCGCGAGG TGATGCCTAC GCTCGACGGC
GCAGAGCAGG CGGAAATACT GCTGCCGCTC CCACTCCCTG CGAATGCAGC TCAGAATCGC
GATCACGAAG ACTACAACAT CGTCGGCAAG CTGAAGCGCG GCGTGTCAGT TGAACAAGCG
CAAGCCGAAA TGGACACGAT TACCGCGCGT CTGCGCCATG AGTTTCCTGA AGCCTATCCA
CCGAACGGTG GCTTGACGTT TGGCATCGTG CCGCTGCTCG AGCAGGTAGT CGGAAACGTT
CGCCACACGT TGTACCTGCT GCTGGGTGCA GTCGCTTTTG TCCTATTGAT TGCGTGCGTG
AACGTTGCGA ACCTGCAGTT GTCGCGCGCC GTCGCGCGGA AGAAAGAGTT CGCGGTGCGC
ACCGCGCTCG GCGCCACGCC GGTGCGCATT CTTCGTCAGT TGCTTACAGA GGGGGTAATG
CTTGCTCTTG GCGGAGGTTC GTTGGGCGTC CTCGTGGCAT CAATCGCGCT GCGCTGTGTG
CGGCTGCTGG GGCCGCAGAG CGTTCCGAGA TTGAGTGACA TCGAAATCGG CGTTCCCGCT
CTGCTATTCA CGTTCACAGT TTCGATCCTG TCGGCGATCC TGTTTGGACT GGCTCCCGCG
CTTCGCGTTT CCCGCCTCGA CGTCCAAATG GCCATGCAGG ACAACAGCCG TACCTCGGCA
GGCGTGAGTG CGATTTGGGG CAAAGGTGAT TCCCTCCGCC GCTTCCTGGT GATCGGCGAG
ATCGCCCTCT GCACCGTCGT TTTAATTGGC GCTGGGCTGC TGATTCGGAG TTTCGCGCGC
GTCCGCGATG TTGATCCCGG TTTCAATGCG CGAAACGTCC TTACCCTCGA ACTCACGATG
ACGGGCGAGC GGTATAAAGA CAAGTTCGCA GTTCTCGGCG CCTATCACGA TCTGTGGCAG
CGCCTTGAGA CCTTGCCGGG CCTTGGCGCG GCGGGCGCCG TGACTTCGTT ACCTCTGAGC
CAAATGTTCG CCTGGGGTCC CATCACGGTT GAGGGACGTG TGCCGCCATC CGGAGAGAAG
TTCATCAACG CCGACATACG CATGGTCAAC GGACACTACT TCCAGGCCAT GGAAATCCCG
CTGCACGCTG GACGGTTGTT CAACGACGGC GACGCCCTCG ACAAACCTTC CGTCGCGATC
GTTGACGACT ACATGGCGCA GCAACTTTGG CCTAACCAGG ACCCAGTCGG CAAGCGTCTT
CATCTCGGCG GAATCGGTGA GACCGATTCT CCCTGGATCA CCGTGGTCGG CGTGATCGGT
CGTGTGAAGC AATACACGCT GGACTCGGAC GCACGAATCG CCTTTTATCT TCCACAAACC
CAGTACGTCA CCCGAGCCAT GAATGTCGTC CTGCGGAGCA ACAACGATCC GAGTACGCTG
GCTGGCGCGG TCAAACAGCA GATCCACGAA CTTGATCCCG ACCTGCCGCT CTACAACGTC
ACGACCATGC AGCAGCGTTT GGAAAAATCG CTAGCGCGGC GCCGGTTCGT AATGCTCGTC
CTCGGAGTGT TCGCGGCAAT TTCGTTTGGC CTCGCCGTAA TTGGAATCTA CGGGCTGGTC
GCCTACCTGG TAGGGCAGGG CAGCCGCGAG CTCGGTATCC GGCTGGCGCT GGGAGCAAGC
CGAGCAAACA TCATGAACCT CATCGTAAGA GGCGGGCTGG TCCTGGCGGT ATCAGGTGTG
GGTATCGGCG TTATAGGAGC GCTGGTGGTT GGGCGACTGA TGCGTTCACT GCTTTACGGA
GTCGGATCCG TCGATATCGC CACGTTCGTA GCGGTTCCGG TCCTTTTGAC TTGTACTGCG
TTTGTCGCCA GTGTGATCCC GGCGCGCCGT GCCTCTCGCA TCGATCCAAC TGCGTCATTG
CGATGCGAAT AA
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| Protein sequence | MSILLKDIRV ALRMLAAAPA FTLTAVLSLA IGIGVNTTIF SIVDGLLLRP LPYKDAERLV
ILWNRSPGLG ITEDWFSTAQ YFDIKNGHHG FEQVAIAIGA NYNLTGSGEP ERLGAIRVSS
NLLPMLGQQA ALGRTFAADE DVPGRTATAV LSYGTWTRRF GSDPAVLGKK VMLNGAPYEI
VGVMPRSFSL PREVMPTLDG AEQAEILLPL PLPANAAQNR DHEDYNIVGK LKRGVSVEQA
QAEMDTITAR LRHEFPEAYP PNGGLTFGIV PLLEQVVGNV RHTLYLLLGA VAFVLLIACV
NVANLQLSRA VARKKEFAVR TALGATPVRI LRQLLTEGVM LALGGGSLGV LVASIALRCV
RLLGPQSVPR LSDIEIGVPA LLFTFTVSIL SAILFGLAPA LRVSRLDVQM AMQDNSRTSA
GVSAIWGKGD SLRRFLVIGE IALCTVVLIG AGLLIRSFAR VRDVDPGFNA RNVLTLELTM
TGERYKDKFA VLGAYHDLWQ RLETLPGLGA AGAVTSLPLS QMFAWGPITV EGRVPPSGEK
FINADIRMVN GHYFQAMEIP LHAGRLFNDG DALDKPSVAI VDDYMAQQLW PNQDPVGKRL
HLGGIGETDS PWITVVGVIG RVKQYTLDSD ARIAFYLPQT QYVTRAMNVV LRSNNDPSTL
AGAVKQQIHE LDPDLPLYNV TTMQQRLEKS LARRRFVMLV LGVFAAISFG LAVIGIYGLV
AYLVGQGSRE LGIRLALGAS RANIMNLIVR GGLVLAVSGV GIGVIGALVV GRLMRSLLYG
VGSVDIATFV AVPVLLTCTA FVASVIPARR ASRIDPTASL RCE
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