Gene Acid345_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3443 
Symbol 
ID4070327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4062389 
End bp4064059 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content61% 
IMG OID637985465 
Productamidohydrolase 3 
Protein accessionYP_592518 
Protein GI94970470 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.6586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC GCCGCAGTGC GTTCCTCCTA CTCATGCTTT CGTTTACGGC CTGCTTTGCG 
GAAGAACGTC CCTCCGCCAA TACGATCATC ACCAACGCCC ATATCTATAC TGTGGACGCG
AACCATCCCA CGGCAGAATC GGTGGCGATC CTCGGCGACA AGATCGTGGC TGTCGGAACC
AACGCCGAGA TCGACGCTTG GCGCGGGGAG AAGACCCAGG TCATTGACGG CCGCGGGCAC
CTGCTTCTCC CCGGATTCAA CGACGCGCAC GTCCACTTCG TTCCCGGCGG CCAGCAGTTG
GACTCCATCA ACCTCCGCGA AGCTGCAACG CCCGAGGCGT TCAAGCAGAC CGTCGCCGAC
CGGGTGAAGA AGACCGCGAA GGGCGAGTGG ATCACCGGAG GCGACTGGGA CGAGCAAAAG
TGGAACCCGG CGGTGCTGCC GACGAAAGAA CTGATTGACG CTGTCAGCCC GGAAACGCCG
GTCTTCGTCA CCCGCTACGA CGGCCATATC TCCCTGGCGA ACTCCTACGC GCTGAAACTG
GCGGGTATCA CCGCGAAAAC CAAGGCCCCA GCGGGCGGCG AGATCGTTCG CGATAAGAGC
GGCAATCCAA CCGGCGTGCT GAAGGATGCA GCGCAAGGGC TGATGTACGC CAAGATTCCC
GACCTCACGC ACGATCAGCG CGTCCGCGCG GCGAAGCGGG CGCTGGCGCA TGCGGCGTCG
GTCGGCGTAA CCAGCGTTCA GGACATGAAC CCGAGCTATG CCGATATTGC GGTGTATTCG
GAGTTGGCAG AGAAAGGCGA ACTGACCACG CGCATTTATG CAGCGCCAAT GCTCGAAGGC
TGGAACGATT TCGCCAAGAT CGGCGTTCGT CGGGCGTGGG GATCGCCGTA TCTGCGCTTC
GGCGCGATGA AGACCTACGC CGACGGATCG CTCGGCGCGA CGACCGCGTA CTTCTTCGAA
CCCTACACCG ACGCCCCAAA CTCGCGCGGC TTGCTCTCGG AAGAGATGCA TCCGATCTCG
GCGGAGCGCG AGCGGTTGAT CAAAGCCGAT GCCGCACACC TGCAGATCTG CGCCCATGCT
ATCGGTGATG CCGGCATATC GACGATGCTC GATCTCTTCC AGGATGTGGT GAAGGCCAAC
GGAACTTACG ATCGGCGCTG GCGCATCGAG CACTCGCAGC ATCTCGCAGA GAAAGACTTC
CAGCGCTATG CCGATTTGGG CGTGATCGCC TCGGTGCAGC CATATCACGC GATTGACGAC
GGCCGTTTTG CCGAGAAGCG CATTGGATCG GATCGGATCA AGCGGACCTA CGCATTCCGA
ACTTTCCTGG ACAATCACGT GCGCCTGGCC TTCGGCACCG ATTGGACAGT CGCACCGCTG
GCGCCGATGT GGACAATCTA CGCGGCAGTC ACGCGCGCTA CGCTCGACGG CAAGAATCCC
GACGGCTGGG TTCCGGAACA GAAACTGAAA GTAAGCGAGG CTGTCGAGGC TTACACCATG
GGCTCGGCCT ACGCGGAGTT CCAGGAGAAC GTAAAGGGCT CCATTACCGT GGGCAAATAC
GCCGACATGG TGCTTCTGAG CGACGATATC TTCAAAATCC AACCAGCCGC AATCAAAGAC
GTGCAGGTCG AAGTCACGAT GGTCGGAGGC AAGATTACCT ATCGCAAGTA G
 
Protein sequence
MSLRRSAFLL LMLSFTACFA EERPSANTII TNAHIYTVDA NHPTAESVAI LGDKIVAVGT 
NAEIDAWRGE KTQVIDGRGH LLLPGFNDAH VHFVPGGQQL DSINLREAAT PEAFKQTVAD
RVKKTAKGEW ITGGDWDEQK WNPAVLPTKE LIDAVSPETP VFVTRYDGHI SLANSYALKL
AGITAKTKAP AGGEIVRDKS GNPTGVLKDA AQGLMYAKIP DLTHDQRVRA AKRALAHAAS
VGVTSVQDMN PSYADIAVYS ELAEKGELTT RIYAAPMLEG WNDFAKIGVR RAWGSPYLRF
GAMKTYADGS LGATTAYFFE PYTDAPNSRG LLSEEMHPIS AERERLIKAD AAHLQICAHA
IGDAGISTML DLFQDVVKAN GTYDRRWRIE HSQHLAEKDF QRYADLGVIA SVQPYHAIDD
GRFAEKRIGS DRIKRTYAFR TFLDNHVRLA FGTDWTVAPL APMWTIYAAV TRATLDGKNP
DGWVPEQKLK VSEAVEAYTM GSAYAEFQEN VKGSITVGKY ADMVLLSDDI FKIQPAAIKD
VQVEVTMVGG KITYRK