Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3432 |
Symbol | |
ID | 4070316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4052142 |
End bp | 4053089 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637985454 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_592507 |
Protein GI | 94970459 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGA CATACGCATG CACTCAGGCG CGATTCTCTG TATCCGATTG TTATACTTCT TGTTTCATGC TGAAAGAAAC TCTCGAACAG GGGCGCATTC TCGCCGACGC AGCTCTCGAG CGGCTTTTGC CGCCGGGAAC GCAGCGGCCG CCGAGCATTC ACCAGGCGAT GCGCCATAGC GTTTTTGCCG GGGGCAAGCG GCTGCGGCCC ATCCTGGTGA TGGAAGCAGC GCGCATGATT ACCGGCTCGC TGCCCGATGG CGTGGACGAA CTCGGCGCCG CTCTCGAGAT GCTCCACACC TACTCGCTCA TTCACGACGA CCTGCCCGCG CTCGACAACG ACGACCTGCG CCGCGGCCGC CCGACCTGCC ACGTGGCGTT CGGCGAAGCC ACCGCGATCC TCGCCGGCGA CGCGCTCCAG ACTTACGCCT ACGAAGTGAT GGCACGCCTG CGCACGACGG CAGAAGCCAG GGTCCAGATC ATCGAAGAAG TCGCGCACGC CACCGGCACC ATCGACGGCA TGATCGGCGG CCAGGTCCTC GACCTCGAAG CCGAGCACAC CCACGCCGAT GCTGCCACGG TGGAATACAT CCACCGCTCG AAGACCGGTG CGCTGATTAC TGCAAGCGTG GTCGCGGGCG GACTTTATGC CGGCGCTGAC AAAGCCCAAG TCCAGCGCAT CCGCGAGTTT GGGAAGTCGG CGGGGTTGGC GTTCCAGATC GTGGATGATG TGCTCGACGT AACGCAGACC TCAGAGCAGT TGGGCAAAAC CGCCGGCAAA GATACGAAGT CGGAGAAATC CACTTGGCCG TCGTTGTATG GCGTCGACAA GTCGCTGGAG ATGGCCGACG AGCTGGTGTA CACAGCGAAC AAACGCCTTG ATAGCTTCGG CGAGCGCGCG ACGACGTTAA AGGAATTGGC GAAGTTTCTG GTGGAACGAA AGAAGTAA
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Protein sequence | MAQTYACTQA RFSVSDCYTS CFMLKETLEQ GRILADAALE RLLPPGTQRP PSIHQAMRHS VFAGGKRLRP ILVMEAARMI TGSLPDGVDE LGAALEMLHT YSLIHDDLPA LDNDDLRRGR PTCHVAFGEA TAILAGDALQ TYAYEVMARL RTTAEARVQI IEEVAHATGT IDGMIGGQVL DLEAEHTHAD AATVEYIHRS KTGALITASV VAGGLYAGAD KAQVQRIREF GKSAGLAFQI VDDVLDVTQT SEQLGKTAGK DTKSEKSTWP SLYGVDKSLE MADELVYTAN KRLDSFGERA TTLKELAKFL VERKK
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