Gene Acid345_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3432 
Symbol 
ID4070316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4052142 
End bp4053089 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content62% 
IMG OID637985454 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_592507 
Protein GI94970459 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA CATACGCATG CACTCAGGCG CGATTCTCTG TATCCGATTG TTATACTTCT 
TGTTTCATGC TGAAAGAAAC TCTCGAACAG GGGCGCATTC TCGCCGACGC AGCTCTCGAG
CGGCTTTTGC CGCCGGGAAC GCAGCGGCCG CCGAGCATTC ACCAGGCGAT GCGCCATAGC
GTTTTTGCCG GGGGCAAGCG GCTGCGGCCC ATCCTGGTGA TGGAAGCAGC GCGCATGATT
ACCGGCTCGC TGCCCGATGG CGTGGACGAA CTCGGCGCCG CTCTCGAGAT GCTCCACACC
TACTCGCTCA TTCACGACGA CCTGCCCGCG CTCGACAACG ACGACCTGCG CCGCGGCCGC
CCGACCTGCC ACGTGGCGTT CGGCGAAGCC ACCGCGATCC TCGCCGGCGA CGCGCTCCAG
ACTTACGCCT ACGAAGTGAT GGCACGCCTG CGCACGACGG CAGAAGCCAG GGTCCAGATC
ATCGAAGAAG TCGCGCACGC CACCGGCACC ATCGACGGCA TGATCGGCGG CCAGGTCCTC
GACCTCGAAG CCGAGCACAC CCACGCCGAT GCTGCCACGG TGGAATACAT CCACCGCTCG
AAGACCGGTG CGCTGATTAC TGCAAGCGTG GTCGCGGGCG GACTTTATGC CGGCGCTGAC
AAAGCCCAAG TCCAGCGCAT CCGCGAGTTT GGGAAGTCGG CGGGGTTGGC GTTCCAGATC
GTGGATGATG TGCTCGACGT AACGCAGACC TCAGAGCAGT TGGGCAAAAC CGCCGGCAAA
GATACGAAGT CGGAGAAATC CACTTGGCCG TCGTTGTATG GCGTCGACAA GTCGCTGGAG
ATGGCCGACG AGCTGGTGTA CACAGCGAAC AAACGCCTTG ATAGCTTCGG CGAGCGCGCG
ACGACGTTAA AGGAATTGGC GAAGTTTCTG GTGGAACGAA AGAAGTAA
 
Protein sequence
MAQTYACTQA RFSVSDCYTS CFMLKETLEQ GRILADAALE RLLPPGTQRP PSIHQAMRHS 
VFAGGKRLRP ILVMEAARMI TGSLPDGVDE LGAALEMLHT YSLIHDDLPA LDNDDLRRGR
PTCHVAFGEA TAILAGDALQ TYAYEVMARL RTTAEARVQI IEEVAHATGT IDGMIGGQVL
DLEAEHTHAD AATVEYIHRS KTGALITASV VAGGLYAGAD KAQVQRIREF GKSAGLAFQI
VDDVLDVTQT SEQLGKTAGK DTKSEKSTWP SLYGVDKSLE MADELVYTAN KRLDSFGERA
TTLKELAKFL VERKK