Gene Acid345_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3400 
Symbol 
ID4072736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4024182 
End bp4024655 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID637985422 
Productmannosyl-glycoprotein endo-beta-N-acetylglucosamidase 
Protein accessionYP_592475 
Protein GI94970427 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.78201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTC AATCCCAACT CGACATGCTC GAAAAGTTTG GTGAAGCCGC GGGTGCCGAG 
CAGGCAAAAT TCGGCGTGCC GGCGAGCGTG GTGATTGCGC AGGCAATCCT GGAGTCGGGA
TGGGGTGAGC ATCAGCTCGC GACACGCTAC AACAATTTTT TCGGCATCAA GGCGCGCGCC
GGCGAGGAGT ATTGCGAATT CTCCCCGGAT GCGATCGAGA AAGCGGCGGG CGACAAAACC
CGCAAGCGCT ATGCGAAGTT CGGCTCAATG CAGGAAGCAT TCAACCGCCA CGGCGAGCTG
CTCTCCACCG CCGATCGCTA CCAGCCTGCG ATGCGCTTTG CCAATGACCC GCTGGTTTTC
GCCGCGCAAC TTCAACGCTG CGGCTATTCG GAAGATCCCA AGTATGCGCG GAAGCTGACC
ACGCTCATCC GCGATCACAA CCTCACCCGC TTCGACGCCA AGGAGGCCGC ATGA
 
Protein sequence
MTTQSQLDML EKFGEAAGAE QAKFGVPASV VIAQAILESG WGEHQLATRY NNFFGIKARA 
GEEYCEFSPD AIEKAAGDKT RKRYAKFGSM QEAFNRHGEL LSTADRYQPA MRFANDPLVF
AAQLQRCGYS EDPKYARKLT TLIRDHNLTR FDAKEAA