Gene Acid345_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3396 
Symbol 
ID4072732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4020066 
End bp4020857 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID637985418 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_592471 
Protein GI94970423 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.181939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC CATTCGCGTG GCCCGGAGGT AAGAAGCACC TGAAGAAGCG CCTGCTGCAG 
ATGATGCCGG CGCACGAAGC TTACGTCGAA GTCTTCTCGG GATCGGCGAA ATTGCTGTTC
GCAAAAGAGC CTTCGCCCTG GGAGATACTT AACGACATCA ACAGTGACGT GGTGAATTTC
TTCCGCGTCG CGCGCCATCG CGCGGCCGAG CTGGCCGAAC GGTTCGAACA CGAAGTCATC
GCGTCCCAGC GCTTCAAGGC ATTGCGATCG GCGGCGGACG GCGCGAGCGA GATTGACCAG
GCGCTGCGCT TCATCTACCT CGCGTGGTGG TCCTTCGGCG GCAAGGGCGA ACACTTCGCC
TCGCTGCGGA TATCAGAGTT GCGGAAAGCC AAGCATCCGG TGAAGCGATC GCTGCGCCTG
GTGCGCGACC TCATCCACCG CACAGCGGAT CGCCTGGTGG ACGTATTGAT CGAGAACCGC
GACTTCCTGG AATGCATCGA TCGCTACGAC TCAACAGACA CACTGTTCTA CTGCGACCCG
CCCTACACTT CATTCTCGAA GATCGCCCGT TACGGCGAGA TGGCAGAGGC GCGCCACCGC
GACCTGGTGT CGCGCCTGCG GAAGATCCGC GGCAAGTTCA TACTGAGCTA CGACGACTCA
CCGCTGGTGC GATCGCTGAC CGATGGGTTG GAAATACAGG AAGCGCGCGT GCCTTACACG
ATCGCTGCGG GAGAGGCGAA GATCGGTCGC GAGTTGATCA TTTCGAATTT CAGGCTGAAG
AGCGTTGCGT AG
 
Protein sequence
MNSPFAWPGG KKHLKKRLLQ MMPAHEAYVE VFSGSAKLLF AKEPSPWEIL NDINSDVVNF 
FRVARHRAAE LAERFEHEVI ASQRFKALRS AADGASEIDQ ALRFIYLAWW SFGGKGEHFA
SLRISELRKA KHPVKRSLRL VRDLIHRTAD RLVDVLIENR DFLECIDRYD STDTLFYCDP
PYTSFSKIAR YGEMAEARHR DLVSRLRKIR GKFILSYDDS PLVRSLTDGL EIQEARVPYT
IAAGEAKIGR ELIISNFRLK SVA